Gene Information

Name : Pat9b_1190 (Pat9b_1190)
Accession : YP_004115068.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1686
EC number : -
Position : 1336488 - 1337441 bp
Length : 954 bp
Strand : +
Note : PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: esa:ESA_01104 D-alanyl-D-alanine endopeptidase

DNA sequence : 
ATGTCTGTAAAAATACGTATTTCTTTACTGTCGCTGGCGCTGATGATCGGTGCACCGGCAGTAACTACACCTGTTCTGGC
GGCACCGGCTGCTGCGTTGTCCAATCTGGCACCGGTGGCGCAGCCGCAGATTGCGTCCGGCAGTGCAATGATTGTCGATC
TGGATAATGGCAAAGTGCTGTTCTCCAGCCATCCGGACCGTGTGCGTCCGATCGCCTCACTCACCAAACTGATGACAGCG
ATGGTGGTGCTGGATGCGAAGCTGCCGCTGGACGAAATGTTGTCGGTAGATATCAGCCATACTGCGGAAATGCGCGGCGT
ATTTTCCCGTGTGAAGCTCAACAGCGAAATCAGCCGCCGCAATATGCTGCTGCTGGCACTGATGTCCTCGGAAAACCGCG
CCGCTGCCAGCCTGGCGCATCACTATCCGGGCGGCTATGACGCCTTTATTCGCGCCATGAACGCCAAAGCACGTGCCCTC
GGCATGACCCACACCCATTATGTGGAACCGACCGGGCTGTCAATTCATAACGTCTCCAGCGCAGAAGATCTGATCAAACT
GGTGAAAGCCACGCGTCAGTATCCGTTGATTGGTCAGTTGAGCACCACCAAAGAAGATACGGCGGTATTTACTCATCCGA
GCTATGCGTTACCGTTCCGTAACACCAACCATCTGGTGTACAAAAATGACTGGCGCATTCAACTGACCAAAACCGGTTAT
ACCGATGAGGCGGGCCACTGCCTGGTGATGCGCACGGTGATTAACAACCGTCCGGTGGCGCTGGTGGTACTGGATGCCTT
CGGTAAATACACCCACTTTGCCGATGCAAACCGTCTGCGTGACTGGCTGGAAACCGGGAAAGCGGCACCGGTCCCGGCGG
CAGCACTGGCGTATAAAAAGCAGAAGGCCTCGCAAACCGCGAGCACCGGCGCTCAGGGACAGAACGTCGAATAA

Protein sequence : 
MSVKIRISLLSLALMIGAPAVTTPVLAAPAAALSNLAPVAQPQIASGSAMIVDLDNGKVLFSSHPDRVRPIASLTKLMTA
MVVLDAKLPLDEMLSVDISHTAEMRGVFSRVKLNSEISRRNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKARAL
GMTHTHYVEPTGLSIHNVSSAEDLIKLVKATRQYPLIGQLSTTKEDTAVFTHPSYALPFRNTNHLVYKNDWRIQLTKTGY
TDEAGHCLVMRTVINNRPVALVVLDAFGKYTHFADANRLRDWLETGKAAPVPAAALAYKKQKASQTASTGAQGQNVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 7e-43 44
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 7e-43 44