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Name : Pat9b_1098 (Pat9b_1098) Accession : YP_004114976.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Resistance Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1238974 - 1239648 bp Length : 675 bp Strand : - Note : KEGG: ctu:Ctu_13100 KDP operon transcriptional regulatory protein KdpE; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver DNA sequence : GTGACCACCATCTTGATCGTTGAAGATGAAAAGGAGATCCGCCGTTTCGTGCGCTTGGCGCTGGAGGGGGAAGGGTTAAA AATTGTGGAAGCGGAGCAGTTGCAGCGCGGGCTGATTGAAGCCGCTACGCGCAAACCCGATTTGGTGATCCTCGACCTCG GTTTACCCGACGGCGATGGCAATGATTTTATCCGCGAAGTACGCCAGTGGAGCAGCATGCCGGTGATTGTGTTATCTGCC CGCACTGATGAACAGGATAAAATCGCGGCGCTGGATGCCGGTGCGGATGACTATCTCACCAAACCCTTTGGCATTGGTGA ACTGCTGGCACGGGTGCGTGTGGCATTGCGCCGTCATCAGGGCAGCCAGCCTGACCCGGTGTTGAGTTTTGGTGAGGTTA CCGTTGATCTGGCGGCACGACGGGTATTGCGCAGCGGTGAAGAGGTGCATCTGACCCCGACCGAATTCCGCCTGCTCAGC CTGTTGCTGAACAATGCCGGTAAGGTGCTGACACAACGCCAGTTGCTGAACCAGGTGTGGGGACCGAATGCGGTGGAACA CAGTCACTATCTGCGCATTTATATGGGACATTTGCGCCAGAAACTGGAAGCCAATCCCACTCAGCCCAACCATTTGCTGA CCGAAACCGGTATTGGCTATCGCTTTATGCCGTAG Protein sequence : MTTILIVEDEKEIRRFVRLALEGEGLKIVEAEQLQRGLIEAATRKPDLVILDLGLPDGDGNDFIREVRQWSSMPVIVLSA RTDEQDKIAALDAGADDYLTKPFGIGELLARVRVALRRHQGSQPDPVLSFGEVTVDLAARRVLRSGEEVHLTPTEFRLLS LLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEANPTQPNHLLTETGIGYRFMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 8e-27 | 43 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 5e-27 | 43 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-21 | 42 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 3e-21 | 41 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 4e-21 | 41 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 4e-21 | 41 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 4e-21 | 41 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 4e-21 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_1098 | YP_004114976.1 | winged helix family two component transcriptional regulator | NC_013450.8614146.p0 | Protein | 2e-21 | 41 |
| Pat9b_1098 | YP_004114976.1 | winged helix family two component transcriptional regulator | NC_002951.3238224.p0 | Protein | 2e-21 | 41 |
| Pat9b_1098 | YP_004114976.1 | winged helix family two component transcriptional regulator | NC_007793.3914065.p0 | Protein | 2e-21 | 41 |
| Pat9b_1098 | YP_004114976.1 | winged helix family two component transcriptional regulator | NC_002758.1121390.p0 | Protein | 2e-21 | 41 |
| Pat9b_1098 | YP_004114976.1 | winged helix family two component transcriptional regulator | NC_010079.5776364.p0 | Protein | 2e-21 | 41 |
| Pat9b_1098 | YP_004114976.1 | winged helix family two component transcriptional regulator | NC_002952.2859858.p0 | Protein | 2e-21 | 41 |
| Pat9b_1098 | YP_004114976.1 | winged helix family two component transcriptional regulator | NC_007622.3794948.p0 | Protein | 2e-21 | 41 |
| Pat9b_1098 | YP_004114976.1 | winged helix family two component transcriptional regulator | NC_003923.1003417.p0 | Protein | 2e-21 | 41 |
