Gene Information

Name : Selin_0904 (Selin_0904)
Accession : YP_004112200.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 975981 - 976643 bp
Length : 663 bp
Strand : -
Note : KEGG: dak:DaAHT2_0079 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATACAACTCAAAGGAATAGAAAAATCGTATCGGCGTGGCGTGGAAAACGTGCACGCCCTGGCAGGAATCGATCTGGA
AATCGCTGCTGGTGAGCTGATTGCCGTTGTCGGCCCCTCCGGCGCCGGCAAGACCACCCTGCTGCACATTCTCGGCTGCC
TGGATCTGCCCACCAAAGGTCAGATGCACTTTGACGGCGCACGGGTGGACACCATGGGTGAATCTCAGCTGGTGGCCCTG
CGCCGCGAGAAAATCGGCTTTATCTTTCAGCAGTTTTACCTGATTCCCGGCCTCAGCGTCTTCGATAACATCGCCTTGCC
CCTGCTGTTCTCACGCAAGAAGGCCGACCCCGCCGTCATCCGAGAACTGGCGGCAACCGTGGGCCTTGGAGATCGCATCA
ACCACAGCCCTTCACAGCTCAGTGGTGGCGAAATGCAGCGGGTGGCGGTGGCGCGTGCCCTGGTGAACAACCCCGAAATC
ATCCTGGCCGATGAGCCCACGGGCAATCTGGACAGCGAGAACAGCGAAAAGATTTTCGGACTGCTGCGCTCTCTGCACGA
GCGGGGCATCACCGTGGTCATGATCACCCATAACGACGAGCTGGCGCAGCGGGCGCAACGGGTGATCCGCCTGCGTGATG
GAAAGATCTGCAGCAGGCAGTGA

Protein sequence : 
MIQLKGIEKSYRRGVENVHALAGIDLEIAAGELIAVVGPSGAGKTTLLHILGCLDLPTKGQMHFDGARVDTMGESQLVAL
RREKIGFIFQQFYLIPGLSVFDNIALPLLFSRKKADPAVIRELAATVGLGDRINHSPSQLSGGEMQRVAVARALVNNPEI
ILADEPTGNLDSENSEKIFGLLRSLHERGITVVMITHNDELAQRAQRVIRLRDGKICSRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-37 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selin_0904 YP_004112200.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-47 47
Selin_0904 YP_004112200.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-43 47
Selin_0904 YP_004112200.1 ABC transporter-like protein CP001581.1.gene598.p Protein 4e-43 45
Selin_0904 YP_004112200.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-38 44