Gene Information

Name : Selin_0705 (Selin_0705)
Accession : YP_004112005.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 745311 - 746036 bp
Length : 726 bp
Strand : -
Note : KEGG: tkm:TK90_2064 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGCAAGCCGTTTCCAACGACAAATCCGCTATCTTTGAAACCCGCAACCTGGTGAAAACCTACCCCATGGGCGAGGTCAC
CATCCACGCTCTGCGGGGAGTGGACTTACAGCTCTATGCCGGCGAGCTGGTGGTTCTGCTGGGTGCTTCGGGGTCGGGCA
AATCCACCCTGCTCAATATCCTTGGCGGGCTGGACAGCGCCAGCGACGGCGAAGTGCGCTACCGTGACCAACTGCTCAGC
AGTGCCAGCGACCAGGTGCTGACCCGCTTTCGCCGGGAGCATGTCGGTTTTGTCTTTCAGTTTTACAACCTTATTCCCAG
CCTCACCGCCCGTGAAAATGTCGCCATCGCCACGGAGATCAGTCCCAGCCCCATGACCCCCGAAGAGGCCCTGCAGCTGG
TGGAACTGGGGGATCGCATGGATCACTTCCCCGCCCAGCTTTCAGGAGGGGAGCAGCAGCGGGTGGCCATTGCCCGGGCC
ATTGCCAAGAGGCCTGCCGTTCTGCTGTGCGACGAGCCAACCGGTGCCCTGGATTCCCGCACCGGCGTGCTGGTGCTGGA
AGCCATAGAGCATATCAACCGCGAACTGGGCACCACCACCGTCATCATCACCCACAACGAAGTCATCGGCCACATGGCTG
ATCGCGTCATTCGCCTCAGTGACGGACAGATTGCCGATACCCAGGAGAACACGCACCGCCTTCCTCCCCGGGAGCTGCAC
TGGTGA

Protein sequence : 
MQAVSNDKSAIFETRNLVKTYPMGEVTIHALRGVDLQLYAGELVVLLGASGSGKSTLLNILGGLDSASDGEVRYRDQLLS
SASDQVLTRFRREHVGFVFQFYNLIPSLTARENVAIATEISPSPMTPEEALQLVELGDRMDHFPAQLSGGEQQRVAIARA
IAKRPAVLLCDEPTGALDSRTGVLVLEAIEHINRELGTTTVIITHNEVIGHMADRVIRLSDGQIADTQENTHRLPPRELH
W

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-31 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selin_0705 YP_004112005.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-51 51
Selin_0705 YP_004112005.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-29 44
Selin_0705 YP_004112005.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-39 42
Selin_0705 YP_004112005.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-37 42