Gene Information

Name : Selin_0055 (Selin_0055)
Accession : YP_004111370.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 55736 - 56197 bp
Length : 462 bp
Strand : +
Note : KEGG: psa:PST_0127 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G

DNA sequence : 
ATGAAGAAATGGGTTACGGTTCGACGTGCAACAGGTGTGCACAGCAGGGCCAAAGGTTTTACGCTGATTGAAATCATGGT
CGTAGTGGTGATTCTGGGTATTCTGGCGGCCCTGGTGGTGCCCAATATCCTGCAGCGTCCCGACGAGGCACGGGTCACAG
CGGCCCGGGCAGATATCCGCGCCATTGCCAACGCGCTGGAAATGTACCGCCTGGATAACCACACCTACCCCAGCACCGAT
CAGGGACTGGATGCGCTGGTACGGCGTCCTTCCGGTTTTCCTGAAGCGCGTAACTGGAACTCCGAAGGCTACCTCAAGAA
TATTCCCCGCGACCCCTGGGGGAATGACTACCAGTACATCAGCCCCGGCACCCGTGCCACCTATGACCTGTATTCCTTTG
GTGCCGATGGCCGTGAAGGTGGTGAGGGAGTGAATGCGGTTATCGGCAACTGGGATCTCTGA

Protein sequence : 
MKKWVTVRRATGVHSRAKGFTLIEIMVVVVILGILAALVVPNILQRPDEARVTAARADIRAIANALEMYRLDNHTYPSTD
QGLDALVRRPSGFPEARNWNSEGYLKNIPRDPWGNDYQYISPGTRATYDLYSFGADGREGGEGVNAVIGNWDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-25 54
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-25 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selin_0055 YP_004111370.1 general secretion pathway protein G VFG0180 Protein 1e-29 62
Selin_0055 YP_004111370.1 general secretion pathway protein G VFG1871 Protein 5e-24 58
Selin_0055 YP_004111370.1 general secretion pathway protein G VFG2050 Protein 1e-25 54