Gene Information

Name : Selin_0053 (Selin_0053)
Accession : YP_004111368.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 53519 - 54934 bp
Length : 1416 bp
Strand : -
Note : KEGG: ddf:DEFDS_1474 glutamine synthetase type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp

DNA sequence :
ATGTTCAGAAGTATTGATGAAGCCGCCAAGTATATCCGCGACAATGGTGTTGAAGCCGTTGACTTCCGTTTCACCGACCT
GTTTGGCGTGTGGCAGCATATCACCATTTCCGCTGGCGAAGTGGGCGAAGAGACCCTGGAAAATGGCCTGGGTTTTGACG
GCTCCTCTATCCGCGGCTGGTGTGAAATCCACAACTCCGACATGAGTTTCGTCCCCGATGTCACTTCCGCCTTTGTCGAT
CCCTTCTTCCGCCGCAAGACCCTGGTCTTCTGCTGCGATATCGTGGACCCCATCACCACCGAAAAATACAATCGCGATCC
CCGCAATATCGCCGGCAAAGCCGTCAATTACCTGAAGCAGACTGGCATCGCCGACACCGCCTACTTCGGTCCCGAAGCGG
AATTCTTCATCTTTGATGACGTGCGTTTTGACAGCTCCCCCCAGGGTGCATTCTATTTCCTGGACTCCAAGGAAGGTACC
TGGAACACTGGCGCCGACGAAATGCCCAACCTGCAGTACAAGCCGCAGTTCAAGGGCGGTTACTTCCCCGTCCCCCCCAT
GGACTCTCTCCACGAGCTGCGCTCCGAGATGGTTGAAGTTATGGAGAAACTGGGTATTGTCGTTGAAGCCCACCACCACG
AAGTGGCCACTGCCGGTCAGGTGGAAATCGACGTGCGCTTTACCGACATGCTCAAGCAGGCTGACATCATGCAGCTCTAC
AAGTATGTAGTGCGCAACGTGGCTGTGAAGAACAACAAGACTGTCACCTTCATGCCCAAACCTCTCTACGGCGACAACGG
CAGCGGCATGCACTGCCACCAGTCCCTGTGGAAAGATGGCAAGCCCCTCTTCAGTGGTTCCGGCTACGCTGGCCTGAGCC
AGGAGGCCCTGTGGTACCTGGGCGGCATCATCAAACACGCCAAGGCCATCGCCGCCTTCACCAACCCCACCACCAACTCC
TACAAGCGTCTGGTGCCTGGCTTCGAAGCCCCTAACAAGCTGGCCTACAGCTCCCGTAACCGCTCCGCCGCCATTCGCAT
ACCCATCGTGAACTCGCCCAAGGCGCGCCGCGTGGAAATCCGCTTCCCCGACCCCACTGCCAACCCCTACCTGGCCTTCA
GCGTTATGCTCATGGCCGGCCTTGACGGTATTGAAAACAAAATTGATCCCGGCCAGCCTCTGGACAAAAATATTTACGAC
CTGGATCCCGTGGAACTGTCCACCATTCCTTCCATGCCCGGCTCTCTGGAAGAGTCCTTGGCAGCCCTGGAAGAAGATCA
CGAGTTCCTGCTCAAGGGCGACGTGTTCACACCTGACATCATCGAAATCTGGTGTGACTACAAGCGCAACAATGAGATCA
AGCCATTGTCCCTGCGCCCGCACCCCATGGAATTCAGCATGTACTACTCTTACTGA

Protein sequence :
MFRSIDEAAKYIRDNGVEAVDFRFTDLFGVWQHITISAGEVGEETLENGLGFDGSSIRGWCEIHNSDMSFVPDVTSAFVD
PFFRRKTLVFCCDIVDPITTEKYNRDPRNIAGKAVNYLKQTGIADTAYFGPEAEFFIFDDVRFDSSPQGAFYFLDSKEGT
WNTGADEMPNLQYKPQFKGGYFPVPPMDSLHELRSEMVEVMEKLGIVVEAHHHEVATAGQVEIDVRFTDMLKQADIMQLY
KYVVRNVAVKNNKTVTFMPKPLYGDNGSGMHCHQSLWKDGKPLFSGSGYAGLSQEALWYLGGIIKHAKAIAAFTNPTTNS
YKRLVPGFEAPNKLAYSSRNRSAAIRIPIVNSPKARRVEIRFPDPTANPYLAFSVMLMAGLDGIENKIDPGQPLDKNIYD
LDPVELSTIPSMPGSLEESLAALEEDHEFLLKGDVFTPDIIEIWCDYKRNNEIKPLSLRPHPMEFSMYYSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 7e-94 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selin_0053 YP_004111368.1 glutamine synthetase VFG1399 Protein 4e-116 57