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Name : Selin_0302 (Selin_0302) Accession : YP_004111614.1 Strain : Desulfurispirillum indicum S5 Genome accession: NC_014836 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 337993 - 339600 bp Length : 1608 bp Strand : - Note : KEGG: dtu:Dtur_0873 general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase DNA sequence : ATGAAACTCGGGCAGATCCTCTTGGAGATGGGTTGCATCTCCGAAGCACAGCTGCACAATGCACTGAATCAGCAACGCTA CAGCGGCATGCGCATTGGTCAGCAGTGCTGTGAACTGGGTTTTATTGCAGAAGACCAACTCCTGCAAGCCCTCGCCACCC AGTTTCATTTTCCCATGGTTGATCTGAACAGAATCGCCATTGACAGGTCGCTTCAGGAGGGTCTGGAGGCCGCATGGCTC AGGGATGAAGGCATTCTGCCCCTGAGCCGCACCGAAAGCGGCGGCATCCTGCTGGGCATCGTGGACCCCCTCAATCTTGC CGCCGCCGACACCATCGGGCGCCACTTCGACACCTCCGTGCATAAAGCCCTCATCTCACAGTCCCTCCTGGAAGAACACC TGCTCCCCCCGCAGCCCTCCACCCAGACAGCCACCCTGCAGACCCATGACACCACCAGCCCGGAAGGAAGCAACCAGGCC ATCGATATGGTCAATGGCCTGCTGCAGGCCGCCCTGCACATGGAAGCCAGCGACATCCATTTCGAAGCTGCCGGCCAGTT CATGCGCGTGCGCATGCGGGTGGACGGTTGCCTGATGGAGCACAGCATGATCCCCAAGCAACTGGAGCAGGCCGTCATCA CGCGCATCAAAGTTTTGGCGCACCTGGATATTGCCCAGCGCCGCCTGCCCCAGGACGGCAAACTCCAGCACACTTTTCAG GCCAAGCGTTACGACATGCGCGTTTCCACCGTGGCCAATATCCACGGAGAAGGCGCCGTGCTGCGCATCCTGCCCTCCCC CGACAAGCAACCTACCCTTGAGGAGCTGGAGATGGGAGCCACGCTGCCTGAACTTCTGGTGCGACTTGGCAACAGCAGCG GCATGATTCTGGTCGCCGGCCCCACCGGCAGTGGCAAAACCACAACTCTGTACGCCATGATCCGCCACATCAACAGCCTG ACCCGAAAAATCATCACCATCGAAGATCCCGTGGAACACCAGCTGCCCCTGGTGAACCAGATCCAGGTCAACACCAAAGC AGGGCTCGACTTTCCCACCCTGTTGCCCCACCTGCTGCGACAGGATCCCGACGTCATTGTGATCGGCGAAATTCGCGACC GCAAAACGGCAGCTATGGCCTGCCAGGCAGCCCTGACCGGGCACCTCGTACTCTCCACCATACACACCACCACCGCAGCC GCTGCCGTAAACCGCCTGCTGGACATCGGCGTGGAACCCTTTCTCGTCGCCTCCGGCCTCAGCGCCGTCATCGGGCAGCG TCTGGTGCGCAGACTCTGCCCCCATTGCCGCTGCAGCGAACCTTCGCCACAGCCGATCCCTCAGTTCACTGCCCCATACT TCACCGCGAAGGGATGTCCCCACTGCAACCACACCGGCTATCGCCACCGCAGCGGCGTCTTTGAGCTCCTCTGCGTCGAC AGCCGGATCCGCCAGCTCATCAGCCACGCCACATCGGGACTTGAACTGGAAAGCGCCGCCAGAGAACAGATGCACTGCGG CACCCTGTGGGAGAATGGCCTTACCATGGCTGCCCACGGTGTAACCTCTCCAGAAGAAGTGCTGCGGGTATTGCCACGCG GCAACTGA Protein sequence : MKLGQILLEMGCISEAQLHNALNQQRYSGMRIGQQCCELGFIAEDQLLQALATQFHFPMVDLNRIAIDRSLQEGLEAAWL RDEGILPLSRTESGGILLGIVDPLNLAAADTIGRHFDTSVHKALISQSLLEEHLLPPQPSTQTATLQTHDTTSPEGSNQA IDMVNGLLQAALHMEASDIHFEAAGQFMRVRMRVDGCLMEHSMIPKQLEQAVITRIKVLAHLDIAQRRLPQDGKLQHTFQ AKRYDMRVSTVANIHGEGAVLRILPSPDKQPTLEELEMGATLPELLVRLGNSSGMILVAGPTGSGKTTTLYAMIRHINSL TRKIITIEDPVEHQLPLVNQIQVNTKAGLDFPTLLPHLLRQDPDVIVIGEIRDRKTAAMACQAALTGHLVLSTIHTTTAA AAVNRLLDIGVEPFLVASGLSAVIGQRLVRRLCPHCRCSEPSPQPIPQFTAPYFTAKGCPHCNHTGYRHRSGVFELLCVD SRIRQLISHATSGLELESAAREQMHCGTLWENGLTMAAHGVTSPEEVLRVLPRGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-73 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-73 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Selin_0302 | YP_004111614.1 | type II secretion system protein E | VFG1876 | Protein | 3e-71 | 45 |
| Selin_0302 | YP_004111614.1 | type II secretion system protein E | VFG2426 | Protein | 2e-64 | 44 |
| Selin_0302 | YP_004111614.1 | type II secretion system protein E | VFG0182 | Protein | 5e-70 | 43 |
| Selin_0302 | YP_004111614.1 | type II secretion system protein E | VFG2048 | Protein | 2e-73 | 43 |
