Gene Information

Name : Selin_2139 (Selin_2139)
Accession : YP_004113415.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2360582 - 2361745 bp
Length : 1164 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: hmo:HM1_1731 cystathionine beta-lyase

DNA sequence : 
ATGCCAGCACCCCATCATCCCCATAAACCCGCCACCCTCCTCGTTCACCAGGCCGTCGACCGCGACCCCCACACCGGCGC
CTCCGCCGTGCCTATCTATCAGGCGTCCACCTTCCACCACCCCGGCGGTGAGTGCGGACAATACGAGTACAGCCGGGGCG
CCAATCCCACCCGCGAGAACGTGGAGCAGACCATCGCCCTGCTGGAGGGCGGCATCCAGGGCTTTGCCACCAGCTCCGGC
ATGGCAGCCATCGGCGTTGCCCTGAGCCTTCTGCACAGTGGCGACCACCTTATCGTCCCCAGCGATCTCTACGGCGGCAC
CTACCGCTACGTCACCAGCGTCCTGCCCCAGCAGGGCATCCAGTGTTCTTTTGTCAATACCGCGGATCTCGAAGCGCTGA
AAGCGGCCCTGCAGCCCAACACCAGAGGTATTCTGCTGGAAACGCCCTCCAACCCCCTCTTCACCATCGCCGATATCCGC
GCTGTGGCAGAGCTGGCCAGAGAGAGAAATATTCTCACCTTTATCGACAACACCTTTATGACGCCCCTGTTGCAACGGCC
CATTCCCCTGGGCATCGATGTGGTCATCCACAGCGCCACCAAGTTCCTGGGCGGCCACAGCGACCTGCTGGCCGGGCTGG
TAACCACCGCCGACCCCGAGCTGGCCAAAGCCCTCAAGCGCTTCCATAATTCCTTCGGAGCTGTGCTCTCCCCCTTTGAC
AGCTTCCTGCTGGCGCGGGGCATGAAGACCCTCAAAATCCGCCTGGAGACCGCCCAGAGCAATGCCGGCGACCTGGCTCT
GCGTCTGCAGCAGCACCCCAGCGTGTCAAAAGTGTATTACCCCGGCCTCAGCGACTTTGCCCAGGCCGATACCCACTTCC
GTCAGGCCAATGGCCCCGGTGCCGTACTCGCCTTTGAACTCGCATCATCGGATCAGGTAAAGGCCCTTCTGCGCAAACTG
CAGCTGCCCATCATCGCCCCCAGCCTCGGTGGCGTGGAAACCATCGTCACCCACTGTTGGAGCATGTCCCACGCCGCCAT
ACCCGCCGAGGTCAAGAAGGAAATGGGCATTTCGCCCACCCTGATCCGCCTGTGTGCTGGCATTGAAGATGTGGATGACC
TGTGGCATGATCTGGAGCAGGCACTGCACACCCCAGGCAGCTGA

Protein sequence : 
MPAPHHPHKPATLLVHQAVDRDPHTGASAVPIYQASTFHHPGGECGQYEYSRGANPTRENVEQTIALLEGGIQGFATSSG
MAAIGVALSLLHSGDHLIVPSDLYGGTYRYVTSVLPQQGIQCSFVNTADLEALKAALQPNTRGILLETPSNPLFTIADIR
AVAELARERNILTFIDNTFMTPLLQRPIPLGIDVVIHSATKFLGGHSDLLAGLVTTADPELAKALKRFHNSFGAVLSPFD
SFLLARGMKTLKIRLETAQSNAGDLALRLQQHPSVSKVYYPGLSDFAQADTHFRQANGPGAVLAFELASSDQVKALLRKL
QLPIIAPSLGGVETIVTHCWSMSHAAIPAEVKKEMGISPTLIRLCAGIEDVDDLWHDLEQALHTPGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-77 48
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-75 46
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-77 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selin_2139 YP_004113415.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 3e-56 41