Gene Information

Name : Selin_2049 (Selin_2049)
Accession : YP_004113325.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 2238967 - 2240100 bp
Length : 1134 bp
Strand : -
Note : KEGG: toc:Toce_1695 diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-bin

DNA sequence :
ATGACACGCTCAGCCCAATACGAAGTCTCTATGCAGATGGCCTTGAATCTCGCCCGCAAGGGGCTGGGGTTCACCTCCCC
GAATCCGGTGGTGGGGTCTGTGATTGTCGATGCTGCAGGCGCCATTGTGGGAATGGGGTATCACGCGAAGGCGGGCATGG
CTCACGCCGAGGTGGTTGCCCTGAAAGACGCTGGCGAAAAGGCACGGGGGGCGACCCTCTATGTGACCCTCGAACCCTGC
TGTGTGCAGGGGCGCACACCTCCCTGCACCGATGCCATTATCCGCGCTGGTATTCAGAAGGTGGTCTATGCCGCGCAGGA
CCCGAATCCCGCCGTGGCCGGGCGCAGTCGCGCCATTCTCGAGGCGGCCGGCATCGCCGTGGAATCCGGCATCCTGGAGC
CGGAGGCGCGCTACCTCAACCGTCACTTCAACAAGCATATCACCCGGCAGATGCCCTATATTACCCTGAAGTCGGCCATC
ACCCTCGACGGAAAAACGGCGGTGGCCAATGGGCAGTCCCGCTGGATTACCGGTGAAGAGGCCCGTCAGGATGGCCACTT
TCTGCGGGGGATTCACGACGCCATCGCCGTAGGCATCGGAACCATCATCGCCGACGACCCTCTGCTGACCTGCCGTCATG
GGGGCAAAACAGCGTTGCCGCACCCCGATGTGGTGATCTTTGACACCTTTTTGCGTACACCGCGCAACGCCGCCGTGCTG
CGGCCTTCTGAGGCAGAGCGCCGCGTTATCATTGTCACTTCTTCCACCATGATGGAAAGCGACACGGCCACACGCCTTCT
TGGAGCGGGTATCCAGCTGATTGGCCTGCCGCCGGCCAGCCAGGGGCTGCCTCTGCAGCAGGCATTTGCTGCGCTGTACG
AACAGTACGGCATCACATCGGTGCTGGTGGAGGGTGGCGCGGGGCTGACCTCGGCTATTATCAAGGAGACACTGGAAGAT
GAGCATGTGATTTACATGGCACCAAAACTCTTCGGAGATGAGGGGATGACCTGGAGCGGATCCCTGAAGGTGCCGACGCC
CGATAAAGCCTATCAGCTTCGCCTTCACTCGGTGGAGCGCCTTGGCAATGATATCAGGATATGTGCCCACAGGAGGGAAC
ATGGAAATCTTTGA

Protein sequence :
MTRSAQYEVSMQMALNLARKGLGFTSPNPVVGSVIVDAAGAIVGMGYHAKAGMAHAEVVALKDAGEKARGATLYVTLEPC
CVQGRTPPCTDAIIRAGIQKVVYAAQDPNPAVAGRSRAILEAAGIAVESGILEPEARYLNRHFNKHITRQMPYITLKSAI
TLDGKTAVANGQSRWITGEEARQDGHFLRGIHDAIAVGIGTIIADDPLLTCRHGGKTALPHPDVVIFDTFLRTPRNAAVL
RPSEAERRVIIVTSSTMMESDTATRLLGAGIQLIGLPPASQGLPLQQAFAALYEQYGITSVLVEGGAGLTSAIIKETLED
EHVIYMAPKLFGDEGMTWSGSLKVPTPDKAYQLRLHSVERLGNDIRICAHRREHGNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-47 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-47 42