Name : Selin_1996 (Selin_1996) Accession : YP_004113275.1 Strain : Desulfurispirillum indicum S5 Genome accession: NC_014836 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2190084 - 2190947 bp Length : 864 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: neu:NE0155 integrase catalytic subunit DNA sequence : ATGATCAAAGCACTTCAGCCTGAGTATAACCTGCGCCTGCTGTGTGAAGTCCTCGATGTATCCGTCAGTGGGTACTATTC ATGGCGCACACGGCCAGTGTCAGAGCGTCGCAAGGAAAACCTGCGGCTCACGGTTGAAATCAAAGCGGCTCACGAGAAAA CCCGGAAGACATATTCTCCGGAGCGCCTACAACAGGAGCTGATGGCAAATGGAATACATGTCAGTCTCTACCGGATCAGG AAAGTACGCAAGATGCATGGAATAGTGTGCAAACAGAAGCAGAAGTTCAAGGCAACCACCAACTCGAACCACAAGCTGCC AGTGGCACCAAACATACTGAATCAGGAGTTTACCGCCAGTGCCCCTAACCAGGCGTGGCTTACCGACATCACCTATGTTC CAACAGATGAAGGGTGGCTCTACCTTGCTGGTCACAAGGATCTCTACAGTAAAAAGCTGGTGGGGTATGCTATGTCTGAA CGTATGACCAAGAACCTTGTCATGCAGTCACTGCAGCATGCGGTGGAGCTGGAGCGTCCCGGCAAGGGGCTCATTCACCA CAGCGATCGTGGCAGCCAATATTGCTCAAATGAGTTCAGGCAACAATTGGAGCGTTATGGCATGCAATCTTCCATGAGCC GTCGGGGAAATTGCTATGACAATGCACCAATTGAGAGTTTCTGGGGAATACTGAAGACAGAGTTGATCTATCACAAGCGC TATGCGACACGCCAAGAGGCTATACGTAATATAACCGAGTACATTGAAGTGTTCTATAACAGACAAAGGATGCAGCGGGG ACTTGGGTATCTCTCACCTGCTGCATTCGAACAAAAATATTACAAAGAGAGAAAAACCGCATAA Protein sequence : MIKALQPEYNLRLLCEVLDVSVSGYYSWRTRPVSERRKENLRLTVEIKAAHEKTRKTYSPERLQQELMANGIHVSLYRIR KVRKMHGIVCKQKQKFKATTNSNHKLPVAPNILNQEFTASAPNQAWLTDITYVPTDEGWLYLAGHKDLYSKKLVGYAMSE RMTKNLVMQSLQHAVELERPGKGLIHHSDRGSQYCSNEFRQQLERYGMQSSMSRRGNCYDNAPIESFWGILKTELIYHKR YATRQEAIRNITEYIEVFYNRQRMQRGLGYLSPAAFEQKYYKERKTA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 1e-74 | 59 |
Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 1e-74 | 59 |
hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 7e-75 | 58 |
unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 6e-73 | 58 |
unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 2e-74 | 58 |
unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 9e-75 | 58 |
tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 9e-75 | 58 |
unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 9e-75 | 58 |
c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 1e-74 | 58 |
tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 2e-51 | 42 |
orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 2e-51 | 42 |
orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 2e-51 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Selin_1996 | YP_004113275.1 | integrase catalytic subunit | VFG1706 | Protein | 4e-75 | 58 |