Gene Information

Name : Selin_0018 (Selin_0018)
Accession : YP_004111333.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Unknown
Product : transposase IS204/IS1001/IS1096/IS1165 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3464
EC number : -
Position : 15015 - 16304 bp
Length : 1290 bp
Strand : +
Note : PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: bxe:Bxe_C0885 transposase TnpA

DNA sequence :
ATGACCGAACTTCCCGGCAACATCCTTCACCTGCCGCAATACCAAGTACTGGGCTGCAAATCAACCGACGACGAAATGCA
CTTCCAGGTGGACGTGCCCGATCCCATCGCCTGCGAGGAATGCGTCGTGCAGGGTGAGTTCGTACGGTTCGGCAAGCGTG
ACGTTCCCTATCGTGATCTGCCCATCCACGGCAAGCGGGTCACTCTCTGGGTGGTCCGCCGCCGATACACCTGCCGGGCC
TGCAAGACAACATTCAGGCCCCAGCTACCGGAGATGGTGGACGGATTCCGTATGACACTGCGGCTGCATGAGTACGTGGA
GAAGGAATCCTTCAACCACCCCTACACCTTTGTGGCGGCACAGACCGGCCTGGACGAGAAGACGGTGCGCGACATCTTCA
ACGCCCGCGCCGAGTTCCTGGGGCGCTGGCACCGCTTCGAGACGCCCCGCATCCTGGGCATTGACGAGCTATACCTGAAC
AAGCGCTACCGCTGCATTCTGACCAACATTGAGGAGCGAACCCTGCTCGACCTGCTGGCCACCCGCCGCCAGGACGTGGT
GACCAACTACCTGATGAAGCTGAAAGACCGGCAGAAGGTCGAGATCGTCAGCATGGACATGTGGAACCCCTACCGGGCAG
CGGTCAAGGCTGTGCTGCCCCAGGCCCGTATCGTGGTCGATAAGTTCCATGTGGTGCGCATGGCCAACGATGCCCTAGAG
AGAGTGCGCAAGGGCCTCAGAAAGGAGCTGAAACCGTCCCAGAGCCGGACTCTCAAGGGAGACCGGAAAATCCTACTGAA
ACGCGCTCACGAAGTCTCAGACCGGGAGCGCCTCATCATGGAGACCTGGACAGGCGCGTTCCCGCAACTGCTGGCCGCCT
ACGAGCACAAGGAGCGCTTCTACGGCATCTGGGACGCCACCACACGGCTCCAGGCAGAAGCCGCCCTGGACGAGTGGATA
GCCACCATCCCGAAGGGCCAAAAGGAAGTCTGGAGCGATCTGGTCAGGGCAGTGGGAAACTGGCGCGAAGAGACCATGAC
CTACTTCGAGACGGACATGCCCGTCACCAACGCTTACACGGAGTCCATCAACCGACTGGCCAAGGACAAGAACCGTGAAG
GGCGCGGTTACTCCTTCGAGGTGATGCGGGCACGAATGCTCTACACCACGAAGCACAAGAAGAAGGCACCGACTGCGAAG
GTCTCTCCTTTCTACAAGAAAACCATCGGTTACGGACTGCCGGACTTCGCAGAGGAACTCAACTACGGAGTCGATCTATC
AACCATCTGA

Protein sequence :
MTELPGNILHLPQYQVLGCKSTDDEMHFQVDVPDPIACEECVVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRRYTCRA
CKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLN
KRYRCILTNIEERTLLDLLATRRQDVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALE
RVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRLQAEAALDEWI
ATIPKGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAK
VSPFYKKTIGYGLPDFAEELNYGVDLSTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_386 CAJ77097.1 Transposase Not tested AbaR1 Protein 0.0 99
tpnA ADI24144.1 transposase Not tested AbaR1 Protein 0.0 99
tpnA ADZ05772.1 transposase Not tested AbaR11 Protein 0.0 99
tnpA ACN81032.1 transposase of ISL3 family Not tested AbaR5 Protein 0.0 99
tnpA ACS32044.1 transposase of ISL3 family Not tested AbaR5 Protein 0.0 99
tnpA AGK36656.1 transposase of ISL3 family Not tested AbaR26 Protein 0.0 99
1_52 CAJ77024.1 Transposase Not tested AbaR1 Protein 0.0 99
Pmu_03510 YP_005176249.1 transposase tnpA Not tested ICEPmu1 Protein 8e-80 43