Gene Information

Name : Selin_1751 (Selin_1751)
Accession : YP_004113036.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 1916456 - 1918444 bp
Length : 1989 bp
Strand : +
Note : KEGG: drt:Dret_0851 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region

DNA sequence :
ATGAGCGCGGCAGATTTTTCTTCCCTGAGCGAACCCCAGAAAGAGCAACAACTCACCAATTACATCAAGGGCCTGATAAT
GGATGGCGTGCGCAATGCCAATTCGGGCCATACGGGTGGTGCTTTTTCCTCGGTGGACTTTGCTTACACCCTCTTTCAGA
AACACCTGAATTATGATCCCGACGACTGCCGCTGGTATAATCGCGACCGCTTCGTTCTCTCTGCCGGCCATGAGTCCATG
CTGCTGTACAGCCTGCTGCACCTGCAGGGTTACCTGGACATGGACGAGCTCAAGCGCTTCCGCCAGCTGGGCAGCAAGAC
TCCCGGCCACCCCGAATCCCACCTGACCCCCGGCGTCGAAGCCACCACCGGCCCCCTGGGACAGGGAATTTCCATGGCGG
TGGGCATGGCTCTGGCCTCCAATATCGCTGCCGCTTATCTGGGGGAAAAGGTCGTCAATAACTACACCTACGTCATCTGT
GGTGACGGCGACATCCAGGAACCAGTGGCCCTGGGCTCCTGCCAGCTGGCCGGCCACTACGGTCTTGATCGGCTGATCGT
CTTCTACGACTTCAACAAGATCCAGATCTCCGGCGAAGTGTCCCGCAATGACAGCACCGATATCGCCCAGATGTTCCGCG
CCTTCCAGTGGAATGTCCTGGAGATTGACGGCAACGACCAGGTGGCTGTCGACCAGGCTATCCGCCAGGCCAAGTCAAAC
AGCGGTCGCCCCACCATTATCATCGGCCATACCATCATGGCCCGTGGCTGCGCCACCATGGAGGGCTCCGAAGAGACCCA
CGGTTCGCCCCTGCCCCATGAGGAAATTGCCGCCACCAAGGAGAAGCTGAGCATTCCGGCCGATCAGGCCTTCTTCCTGC
CCACCGAAGCGCTGGAGTTTTTCCGTCGCCGCTTCGACGCACTGCGCCAGGGCCGTAAGTCCTGGGAACAGGAAGTGCAG
CAGGCGTCCGGCAACGCGCAGTTCGCCAGCCTCTTCGATCAGTTCGCCCGTGGCGTGGTACCCGCCATCAACTTCCCCGA
CCTCAATCAGAAAATGGCCACCCGCAAGGCCTTCGGCAAGCTGCTGGAAGCCGCTGCCGACAGCTTTGTCGCCTTCGCCG
GCGGCTCCGCCGACCTTGAGCCCAGCAACAACACCACCGGCTTTCTGGACAAGGTGGGCGACTATACCCGGGAGAACCAC
CGTGGCCGCAGCATCCCCTTTGGTGTGCGTGAATTCCCCATGGGAGCCATCACTAATGGCATGCAGCTCTTCGGCATCAA
GTCCTTTGGGGCTACCTTCCTGAGCTTTGCCGACTACCAGCGGGCCGCCATCCGCCTCGCCGCCCTGCAGCAGATCGGTA
CCATGTTTATCTACACCCACGACTCCATCTATCTGGGTGAAGATGGCCCAACCCACCAGCCCGTGGAGCATATCCCCTCG
CTGCGCCTGATCCCCAACCTGCTGGTACTGCGCCCCGCCGATGGCGGTGAGACCGCCCGGGCCTTCCAGTTTGCCCTGCA
GTCCCAGCGGCCCACGGCCCTGTGCCTGACCCGCCAGGATCTGGAACCTGTAACGACCACCTACTACGGCAGCGGGGGCG
ATTTCGCCCGTGGCGGGTATATCCTGCGCCGCGAGAACGGCACTCTGGGAATTATTCTGATCGCCACTGGCTCGGAAGTG
AAGCTGGCCCTCGATGTGGCCACTGAACTGGAGAACAGCAAAGGCTGTGGGGTGCGCGTGGTCAATATGCCTTGCTGTGA
ACTGTTCGATGAACAGCCCGCCTCCTATCGTGACGAAGTACTGCCCCCCTCTGTGGCGCGCCGCGCTTCAATCGAGGCCG
CTTCCACCTCCGGCTGGTACAAGTATATCGGCCTGCAGGGTGTGGCCATCGGCGTTGACACCTTTGGTGAAAGCGCGCCA
GCCAAGGATCTGGAAAAACATTTCGGATTGACTACTGAAATGGTTGCCAAATCGCTCGCGTCATTGTAA

Protein sequence :
MSAADFSSLSEPQKEQQLTNYIKGLIMDGVRNANSGHTGGAFSSVDFAYTLFQKHLNYDPDDCRWYNRDRFVLSAGHESM
LLYSLLHLQGYLDMDELKRFRQLGSKTPGHPESHLTPGVEATTGPLGQGISMAVGMALASNIAAAYLGEKVVNNYTYVIC
GDGDIQEPVALGSCQLAGHYGLDRLIVFYDFNKIQISGEVSRNDSTDIAQMFRAFQWNVLEIDGNDQVAVDQAIRQAKSN
SGRPTIIIGHTIMARGCATMEGSEETHGSPLPHEEIAATKEKLSIPADQAFFLPTEALEFFRRRFDALRQGRKSWEQEVQ
QASGNAQFASLFDQFARGVVPAINFPDLNQKMATRKAFGKLLEAAADSFVAFAGGSADLEPSNNTTGFLDKVGDYTRENH
RGRSIPFGVREFPMGAITNGMQLFGIKSFGATFLSFADYQRAAIRLAALQQIGTMFIYTHDSIYLGEDGPTHQPVEHIPS
LRLIPNLLVLRPADGGETARAFQFALQSQRPTALCLTRQDLEPVTTTYYGSGGDFARGGYILRRENGTLGIILIATGSEV
KLALDVATELENSKGCGVRVVNMPCCELFDEQPASYRDEVLPPSVARRASIEAASTSGWYKYIGLQGVAIGVDTFGESAP
AKDLEKHFGLTTEMVAKSLASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 5e-95 44
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-93 43