Gene Information

Name : Selin_0016 (Selin_0016)
Accession : YP_004111331.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Resistance
Product : cation efflux protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1230
EC number : -
Position : 13581 - 14477 bp
Length : 897 bp
Strand : +
Note : PFAM: cation efflux protein; KEGG: maq:Maqu_4003 CDF family heavy metal/H(+) antiporter

DNA sequence :
ATGAGCAAATCCTGTGGTGGCGCCTGTGGCGGTGATGCAACGTCCGCAGCGGATACCGATATACAGGCCTCCTCCGAAGC
GCCAGGGAGATGGGTCAGTGTTTATGCCGTGCCGAAGATGGACTGTCCATCAGAAGAACGAATGATTCGCCTAGCCCTGA
ACGGCTTTGAGGAGATTCGGGCGCTGTCCTTCGACTTGTCGAACCGCCGGCTGAAGGTCGTGCATGACGGCGAGGTCGAG
CCCGTCACCTCGAAACTGAAGACCTTGGGGCTAGGCGCCTCGCTTCAGGAAACCGTCGCTGCAAATCCGGAGACCATCAA
GGCCCCCGAGTTTTCGGCAGCTTCTGCTAAGCAAGAATCCGGGACCCTGCGCTGGTTGCTCGGCATCAATGCACTTCTGT
TCGTGGTGGAAATGACTGCCGGTCTGATCGCCCAGTCCACCGGCCTCATTGCAGAGTCCCTGGACAATTTTGCCGATGCG
GCAGTGTACGGACTCGCTCTTTATGCGGTTGGGCATAGCGTGAAAAGGCAGGTCCGTGTTGCGCACGTTGCTGGTGTGGT
CCAACTGGTTTTGGCTGTTGGCGTGCTCGTAGAGGTGGTGAGACGCTTTGTATTCGGTAGTGAGCCTGAATCGCTGGTGA
TGATGGCTATCGCATTCGTCGCATTGATTGCCAATACCAGTTGTCTGCTGCTCATATCCAAACATCGGGAAGGCGGGGCG
CACATGAAGGCTAGCTGGATATTTTCGGCCAACGACGTGGTGATCAACCTGGGGGTCATCACCGCCGGCGCCCTGGTCGC
GTGGACCGGTTCCAATTATCCGGATCTGATTATCGGCACCATCGCGGGGGTCATTGTACTTAACGGTGCCAGACGCATTT
TGGCGTTGAAGGGTTAA

Protein sequence :
MSKSCGGACGGDATSAADTDIQASSEAPGRWVSVYAVPKMDCPSEERMIRLALNGFEEIRALSFDLSNRRLKVVHDGEVE
PVTSKLKTLGLGASLQETVAANPETIKAPEFSAASAKQESGTLRWLLGINALLFVVEMTAGLIAQSTGLIAESLDNFADA
AVYGLALYAVGHSVKRQVRVAHVAGVVQLVLAVGVLVEVVRRFVFGSEPESLVMMAIAFVALIANTSCLLLISKHREGGA
HMKASWIFSANDVVINLGVITAGALVAWTGSNYPDLIIGTIAGVIVLNGARRILALKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA AGK36654.1 Co/Zn/Cd efflux system component Not tested AbaR26 Protein 2e-109 93
ACICU_00235 YP_001844894.1 heavy metal detoxification protein Not tested AbaR20 Protein 3e-109 93
cadA ACN81030.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 3e-109 93
cadA ACS32042.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 3e-109 93
1_43 CAJ77022.1 Heavy metal detoxification protein Not tested AbaR1 Protein 2e-109 93
1_376 CAJ77095.1 Heavy metal detoxification protein Not tested AbaR1 Protein 2e-109 93
cadA ADZ05770.1 Co/Zn/Cd efflux system component Not tested AbaR11 Protein 2e-109 93