Gene Information

Name : Selin_1514 (Selin_1514)
Accession : YP_004112803.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1654645 - 1656027 bp
Length : 1383 bp
Strand : +
Note : manually curated; TIGRFAM: thiamine biosynthesis protein ThiC; KEGG: mgm:Mmc1_3734 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
GTGTTCACGACATACAACCGTTTCCCCTTCGTCGGGAAACGGTTTTTTATTTTCCACAAAGGAGCAAGCATGAATGTAAC
CCAGATGCACCGGGCCCGCAAAGGCGAAATCACCGAGGCCATGCAGACGGTAGCGGCCAGCGAACAGCTCGAACCGGAGT
TCGTGCGCAGCGAAGTGGCCCGTGGCCGCATGGTCATCACCGCCAACATTAACCACAAGAACCTTGTCCCCATGGGCATC
GGCATCAACGCCCGCTGTAAGGTCAACGCCAACATCGGCAACAGCAAGCTCTCCAGCGGCTGCCGTGAAGAGCTGGAAAA
GCTGCACATGGCCATCAGGTATGGCGCCGACACGGTCATGGACCTTTCCACAGGCGAGGATATCAACCGCATCCGTACCG
CCATCATTGAAAACTCTCCCGTGCCCATCGGCACCGTACCCATGTACCAGGCGGTGGAGGAAGTGGAGGATCCCCTTGAT
CTGAGTGCCCGCAAAATCCTCGATGTCATAGAAGAGCAGGCCCGCCAGGGCGTGGACTACATGACTGTGCACTGCGGCAT
TCTGCGCCGCCACATTCCCATGGCCATTGGCCGCACCACAGGCATTGTCAGCCGTGGTGGCAGCCTGATGGCTCAGTGGA
TGCAGAAGCACCAGAAGGAAAACCCCATCTTCGACCACTACGATGAGCTGCTGGAAATCTGCAAAGCCTACGACGTCACC
CTCTCCCTGGGAGACAGCCTGCGCCCCGGCTGCCTGGCCGACGCCTCCGACGAAGCCCAGCTCAGCGAGCTGGAAGTCCT
GGGTCAATTATGCAAACGAGCCTGGGAGCAGGATGTTCAGGTAATGATCGAAGGCCCCGGCCATGTACCCATCGACCAGA
TCGAGTTCAACGTGCGTAAGCAACAGGAGCTGTGCCACGAAGCCCCCTTCTATGTCCTCGGCCCCCTGGTCACTGACATA
GCCCCCGGCTACGACCACATCACCGGCGCCATCGGTGGCGCCCTGGCAGCCTACTACGGCGTGTCCATGCTCTGCTACGT
CACCCCCAAGGAACACCTGGGCCTGCCCAACGCTGAAGACGTGCGCAACGGCATCATCGCATTCAAGATTGCCGCTCACA
GCGCCAACATCGCCCGCAAGTTTCCCGGCGTCCGCGATCGCGACGACGAGATGAGCCGCGCCCGCTTCGCCTTCGACTGG
CAGAAGCAGTTCGCCCTCTCCCTCGACCCCGAACGCGCCCGTCAGTACCGCATGGAATCCATGCCCGAAGAACTCAGGAA
CGACTGCAGCACCGAACACTGCTCCATGTGCGGACCCAAGTTCTGCTCCATGAATATCAGCCACCAGATCATGAACGCCG
ACGCTGCCAATGCAGCCAAGTAA

Protein sequence :
MFTTYNRFPFVGKRFFIFHKGASMNVTQMHRARKGEITEAMQTVAASEQLEPEFVRSEVARGRMVITANINHKNLVPMGI
GINARCKVNANIGNSKLSSGCREELEKLHMAIRYGADTVMDLSTGEDINRIRTAIIENSPVPIGTVPMYQAVEEVEDPLD
LSARKILDVIEEQARQGVDYMTVHCGILRRHIPMAIGRTTGIVSRGGSLMAQWMQKHQKENPIFDHYDELLEICKAYDVT
LSLGDSLRPGCLADASDEAQLSELEVLGQLCKRAWEQDVQVMIEGPGHVPIDQIEFNVRKQQELCHEAPFYVLGPLVTDI
APGYDHITGAIGGALAAYYGVSMLCYVTPKEHLGLPNAEDVRNGIIAFKIAAHSANIARKFPGVRDRDDEMSRARFAFDW
QKQFALSLDPERARQYRMESMPEELRNDCSTEHCSMCGPKFCSMNISHQIMNADAANAAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 5e-109 56
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 5e-109 56