|
Name : Selin_1493 (Selin_1493) Accession : YP_004112782.1 Strain : Desulfurispirillum indicum S5 Genome accession: NC_014836 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 1625761 - 1627050 bp Length : 1290 bp Strand : + Note : KEGG: shw:Sputw3181_1082 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein DNA sequence : ATGAGCACACCTAAACCCCTCTATGCCCTGATCGACTGCAATAACTTCTATGCCAGCTGCGAGAAGCTATTCAGACCCGA CCTTGACCATCGCTCTGTGATCGTCCTGTCCAATAATGATGGTTGTGTGGTAGCGCGAAGCAAGGAAGCCAAAGCTCTTG GTATCAAAATGGGCGAACCAGCCTTCAAGATTGAGCACATTATAGAGCGGGAAAATATTGCCGTATTCTCATCGAATTAT GCCTTCTACGCTGATATCTCCATGCGGGTAATGCAGACCATCGAGCATCATTGGCCCGACATGGAAATCTACTCCATTGA TGAAGCTTTTCTGGACCTTTCCAGGCTCCCGTCAACAACCAGCCCCACAGAGCTCTGCCATTCCATCAGGGATGCGATAT ACCAGTGGACTGGCATCACCGTCAGTATTGGTATAGCCCCTACAAAAACCCTGGCCAAGGCCGCCAATTATGCCGCCAAA AAGTACCCGGCGACAGGTGGTGTTGTACATCTGGAAACCCAGCAAAGAGCGCAGAAGCTTCTGCAGCTCATGCCGGTGGG AGAGATATGGGGGATTGGACCACGAACCACTGCCAAGCTCATAAACATGGGCATGGAAACCGCAGCAGATCTGGCCGGTA AAGACCCACTAAGCATGAAAAAGCGATTCTCTGTGAACGTCGCCCGCACCATTGAAGAGCTTCAGGGGAACCCTTGTTTC CACCTCGAAGAAGACCCAGCACCCCGCAAGCAGATGGTATGCTCTCGCAGCTTTGGTGAGCGAATTACACAAAAAGAGGC TATGGCCCAGGCCGTCAGCACCTATGCCAGCCGCGTAACCGAGAAGATGCGCGAGCAAAACCTGCAGACCAATCATGTGA CCGTATTTCTGCGCACCAGTCCCTTCAACGATAGCTTGCCCTACTACAGCAATGCTGCCAGTGCAACTATTGGCGCACCA AGTAATGACACCCGCGAAATTATTGCCATGGCCAATCAGTTGCTTGATTACATCTGGAAAGACGGGTACCGCTATGTGAA AGCCGGGGTGATGCTCAGCGAACTCACCCCAGCATCAAGCCGGGAGTTGGGCTTATGGGAAGATCGCCAGGAATATGACA AACAGCAACGCCTCATGGCAGCCATTGACAGCATCAATCATTCAGGCAAGGGCCGAGTATGGTTTGCCAGCGAGGGCGCT TCCAGGAAGCAGGAGTGGAAGGTCAAGCGAGAGCGACTATCGCCCAGCTACACGACAGACTGGAGTGAGCTACCGGTGGT ACGGCTATAG Protein sequence : MSTPKPLYALIDCNNFYASCEKLFRPDLDHRSVIVLSNNDGCVVARSKEAKALGIKMGEPAFKIEHIIERENIAVFSSNY AFYADISMRVMQTIEHHWPDMEIYSIDEAFLDLSRLPSTTSPTELCHSIRDAIYQWTGITVSIGIAPTKTLAKAANYAAK KYPATGGVVHLETQQRAQKLLQLMPVGEIWGIGPRTTAKLINMGMETAADLAGKDPLSMKKRFSVNVARTIEELQGNPCF HLEEDPAPRKQMVCSRSFGERITQKEAMAQAVSTYASRVTEKMREQNLQTNHVTVFLRTSPFNDSLPYYSNAASATIGAP SNDTREIIAMANQLLDYIWKDGYRYVKAGVMLSELTPASSRELGLWEDRQEYDKQQRLMAAIDSINHSGKGRVWFASEGA SRKQEWKVKRERLSPSYTTDWSELPVVRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 3e-94 | 51 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 3e-94 | 51 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 1e-68 | 41 |
