Gene Information

Name : Selin_1486 (Selin_1486)
Accession : YP_004112775.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Unknown
Product : transposase IS204/IS1001/IS1096/IS1165 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3464
EC number : -
Position : 1619787 - 1621079 bp
Length : 1293 bp
Strand : -
Note : PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: bxe:Bxe_C0885 transposase TnpA

DNA sequence :
ATGAACGATTTACAAGAAAGTAACAGCATACATTTGCCAGAGTATGAGGTGCTTGGCTGCAAAACAACCGACGACGAAAT
GCACTTCCAAGTGGACGCGCCCGATCCCATTGCCTGCGAAGAATGCGGAGTGCAGGGTGAGTTCGTGCGGTTCGGCAAGC
GTGATGTTCCCTATCGTGATCTGCCCATCCACGGCAAGCGGGTCACCCTCTGGGTAGTCCGACGCCGGTACACCTGCCGG
GCCTGCAAGACCACCTTCAGGCCCCAGCTACCGGAGATGGTGGACGGTTTCCGCATGACGTTGCGTCTGCATGAATACGT
GGAGAAGGAATCTTTCAATCACCCCTACACCTTCGTAGCGGCACAGACCGGTCTAGACGAGAAGACGGTACGCGACATCT
TCAACGCCCGCGCCGAGTTCCTGGGGCGCTGGCACCGCTTCGAGACACCCCGCATTTTGGGTATCGACGAGCTGTACCTG
AACAAGCGCTACCGCTGCATTCTGACCAACATCGAGGAGCGAACCCTGCTCGACCTGCTGGCTACACGCCGACAGGATGT
GGTAACCAACTACCTAATGAAGCTGAAAGACCGACAAAAGGTCGAGATCGTCAGCATGGACATGTGGAACCCCTACCGGG
CAGCGGTCAAGTCCGTGCTGCCACAGGCCCGCATTGTGGTCGATAAGTTCCATGTGGTGCGTATGGCCAACGATGCCTTG
GAGAAGGTGCGTAAGGGTCTCAGAAAGGATCTGAAACCCGCCCAAAGCCGAACCCTCAAGGGAGACCGGAAAATCCTGCT
GAAACGTGCTCACGAAGTCTCAGACCGGGAGTGGTTAATCATGGAAACATGGACGGGTGCATTCCCGCAGCTGCGAGCCG
CATACGAACACAAGGAGCGTTTCTACGGTATTTGGGACGCCTCCACACGGGTACAGGCAGAGGCCGCCCTGGACGACTGG
ATAGACACCATCCCCAAGGGCCAGAAGGAAGTCTGGAGCGATCTGGTCAGGGCTGTGGGCAACTGGCGCGAAGAGATCAT
GACCTACTTTGAGACAGACATGCCCGTCACTAACGCTTACACTGAGTCGATCAACCGATTGGCCAAGGACAAGAACCGTG
AAGGACGTGGTTACTCCTTCGAGGTGATGCGGGCACGAATGCTCTACACCACCAAGCACAAGAAGAAGGCCCCGACTGCG
AAGGTCTCTCCGTTCTACAAGAAAACCATCGGTTATGGACTGCCAGACTTCTTAGAGGAACTCAACTACGGGGTCGATCT
ATCAACCATCTGA

Protein sequence :
MNDLQESNSIHLPEYEVLGCKTTDDEMHFQVDAPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRRYTCR
ACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYL
NKRYRCILTNIEERTLLDLLATRRQDVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKSVLPQARIVVDKFHVVRMANDAL
EKVRKGLRKDLKPAQSRTLKGDRKILLKRAHEVSDREWLIMETWTGAFPQLRAAYEHKERFYGIWDASTRVQAEAALDDW
IDTIPKGQKEVWSDLVRAVGNWREEIMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTA
KVSPFYKKTIGYGLPDFLEELNYGVDLSTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_386 CAJ77097.1 Transposase Not tested AbaR1 Protein 0.0 95
tpnA ADI24144.1 transposase Not tested AbaR1 Protein 0.0 95
tpnA ADZ05772.1 transposase Not tested AbaR11 Protein 0.0 95
tnpA ACN81032.1 transposase of ISL3 family Not tested AbaR5 Protein 0.0 95
tnpA ACS32044.1 transposase of ISL3 family Not tested AbaR5 Protein 0.0 95
tnpA AGK36656.1 transposase of ISL3 family Not tested AbaR26 Protein 0.0 95
1_52 CAJ77024.1 Transposase Not tested AbaR1 Protein 0.0 95
Pmu_03510 YP_005176249.1 transposase tnpA Not tested ICEPmu1 Protein 2e-79 45