Gene Information

Name : Selin_0013 (Selin_0013)
Accession : YP_004111328.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Resistance
Product : adenylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.47
Position : 10673 - 11611 bp
Length : 939 bp
Strand : -
Note : manually curated; KEGG: asa:ASA_P4G100 aminoglycoside resistance protein; PFAM: DNA polymerase beta domain protein region

DNA sequence : 
ATGGCTTGTTATGACTGTTTTTTTGTACAGTCTATGCCTCGGGCATCCAAGCAGCAAGCGCGTTACGCCGTGGGTCGATG
TTTGATGTTATGGAGCAGCAACGATGTTACGCAGCAGGGCAGTCGCCCTAAAACAAAGTTAAACATCATGAGGGAAGTGG
TGATCGCCGAAGTATCGACTCAACTATCAGAGGTAGTTGGCGTCATCGAGCGCCATCTCGAACCGACGTTGCTGGCCGTA
CATTTGTACGGCTCCGCAGTGGATGGCGGCCTGAAGCCACACAGTGATATTGATTTGCTGGTTACGGTGACCGTAAGGCT
TGATGAAACAACGCGGCGAGCTTTGATCAACGACCTTTTGGAAACTTCGGCTTCCCCTGGAGAGAGCGAGATTCTCCGCG
CTGTAGAAGTCACCATTGTTGTGCACGACGACATCATTCCGTGGCGTTATCCAGCTAAGCGCGAACTGCAATTTGGAGAA
TGGCAGCGCAATGACATTCTTGCAGGTATCTTCGAGCCAGCCACGATCGACATTGATCTGGCTATCTTGCTGACAAAAGC
AAGAGAACATAGCGTTGCCTTGGTAGGTCCAGCGGCGGAGGAACTCTTTGATCCGGTTCCTGAACAGGATCTATTTGAGG
CGCTAAATGAAACCTTAACGCTATGGAACTCGCCGCCCGACTGGGCTGGCGATGAGCGAAATGTAGTGCTTACGTTGTCC
CGCATTTGGTACAGCGCAGTAACCGGCAAAATCGCGCCGAAGGATGTCGCTGCCGACTGGGCAATGGAGCGCCTGCCGGC
CCAGTATCAGCCCGTCATACTTGAAGCTAGACAGGCTTATCTTGGACAAGAAGAAGATCGCTTGGCCTCGCGCGCAGATC
AGTTGGAAGAATTTGTTCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAA

Protein sequence : 
MACYDCFFVQSMPRASKQQARYAVGRCLMLWSSNDVTQQGSRPKTKLNIMREVVIAEVSTQLSEVVGVIERHLEPTLLAV
HLYGSAVDGGLKPHSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGE
WQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWAGDERNVVLTLS
RIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aadA1 ACY75515.1 aminoglycoside adenyltransferase Not tested Tn6060 Protein 1e-117 99
aadA1 CAD92142.1 aminoglycoside adenyltransferase Not tested Not named Protein 1e-117 99
aadA1 YP_005797133.1 aminoglycoside 3'-adenyltransferase Not tested AbaR4e Protein 7e-118 99
aadDA1 CAJ77087.1 Aminoglycoside 3-adenylyltransferase Not tested AbaR1 Protein 5e-118 99
aadA1 YP_005797149.1 aminoglycoside 3'-adenyltransferase Not tested AbaR4e Protein 7e-118 99
aadA1 ACV89835.1 AadA1 aminoglycoside (3')(9) adenylyltransferase Not tested AbaR7 Protein 5e-118 99
aadA1 YP_006098376.1 aminoglycoside adenylyltransferase Not tested Tn2411 Protein 7e-118 99
unnamed AFV53113.1 AadA1 aminoglycoside (3') adenyltransferase Not tested AbGRI2-1 Protein 5e-118 99
aadA1 ACN81025.1 AadA1 aminoglycoside (3')(9) adenylyltransferase Not tested AbaR5 Protein 7e-118 99
aadA1 AGK36646.1 AadA1 aminoglycoside (3')(9) adenylyltransferase Not tested AbaR26 Protein 5e-118 99
aadA1 CAJ77048.1 Aminoglycoside adenylyltransferase Not tested AbaR1 Protein 1e-121 99
aadA1 AAL08435.1 streptomycin adenyltransferase AadA1 Not tested SRL Protein 3e-112 96
aadA25 YP_005176241.1 aminoglycoside 3''-O-adenyltransferase protein Not tested ICEPmu1 Protein 3e-110 92
aadA2 ACF06158.1 aminoglycoside 3''-adenyltransferase Not tested Tn5036-like Protein 8e-106 87
aadA2 AAK02046.1 streptomycin/spectinomycin resistance protein Not tested SGI1 Protein 5e-105 86
aadA2 AGF35027.1 AadA2 aminoglycoside adenylyltransferase Not tested SGI1 Protein 5e-105 86
aadA7 AGK06932.1 aminoglycoside adenyltransferase Not tested SGI1 Protein 7e-91 72
aadA7 AGK06969.1 aminoglycoside adenyltransferase Not tested SGI1 Protein 7e-91 72
aadA7 AGK07015.1 aminoglycoside adenyltransferase Not tested SGI1 Protein 7e-91 72
aadA7 AGK07073.1 aminoglycoside adenyltransferase Not tested SGI1 Protein 7e-91 72
aadA7 AAR21854.1 aminoglycoside (3'')(9) adenylyltransferase; AAD(3'')(9) Not tested SGI1 Protein 7e-91 72
aadA7 AAT37846.1 aminoglycoside adenyltransferase Not tested Class I integron Protein 7e-91 72
aadA7 AGF35062.1 aminoglycoside adenyltransferase Not tested SGI1 Protein 7e-91 72

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selin_0013 YP_004111328.1 adenylyltransferase AJ584652.2.gene7.p01 Protein 1e-116 99
Selin_0013 YP_004111328.1 adenylyltransferase AY123251.gene3.p01 Protein 3e-118 99
Selin_0013 YP_004111328.1 adenylyltransferase NC_010410.6003168.p0 Protein 3e-118 99
Selin_0013 YP_004111328.1 adenylyltransferase Y18050.2.gene6.p01 Protein 6e-118 99
Selin_0013 YP_004111328.1 adenylyltransferase AF313471.1.gene3.p01 Protein 3e-118 99
Selin_0013 YP_004111328.1 adenylyltransferase AJ704863.gene12.p01 Protein 2e-106 99
Selin_0013 YP_004111328.1 adenylyltransferase AY339625.2.gene17.p0 Protein 3e-118 99
Selin_0013 YP_004111328.1 adenylyltransferase AM932669.1.gene3.p01 Protein 4e-116 99
Selin_0013 YP_004111328.1 adenylyltransferase JN596991.2.gene3.p01 Protein 6e-118 99
Selin_0013 YP_004111328.1 adenylyltransferase FR748153.1.gene5.p01 Protein 6e-118 99
Selin_0013 YP_004111328.1 adenylyltransferase NC_010410.6003170.p0 Protein 7e-122 99
Selin_0013 YP_004111328.1 adenylyltransferase AF047479.2.orf1.gene Protein 4e-107 88
Selin_0013 YP_004111328.1 adenylyltransferase AF294653.1.gene3.p01 Protein 5e-104 87
Selin_0013 YP_004111328.1 adenylyltransferase AF174129.3.gene3.p01 Protein 1e-103 87
Selin_0013 YP_004111328.1 adenylyltransferase EU118119.1.orf1.gene Protein 3e-105 86
Selin_0013 YP_004111328.1 adenylyltransferase AY263741.gene.p01 Protein 2e-103 85
Selin_0013 YP_004111328.1 adenylyltransferase U37105.2.gene4.p01 Protein 5e-94 76
Selin_0013 YP_004111328.1 adenylyltransferase AY139598.1.gene2.p01 Protein 4e-72 58
Selin_0013 YP_004111328.1 adenylyltransferase NC_010558.1.6275994. Protein 9e-73 58
Selin_0013 YP_004111328.1 adenylyltransferase DQ865198.gene.p01 Protein 9e-73 58
Selin_0013 YP_004111328.1 adenylyltransferase NC_003198.gene.p01 Protein 6e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selin_0013 YP_004111328.1 adenylyltransferase VFG1026 Protein 1e-112 96