Gene Information

Name : Selin_1129 (Selin_1129)
Accession : YP_004112420.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 1242638 - 1244266 bp
Length : 1629 bp
Strand : +
Note : KEGG: pap:PSPA7_3489 glutathione import ATP-binding protein GsiA; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase

DNA sequence :
GTGACGCCTTTGACCCACGAAGACACTGAAAAAGACTCTGTAAACCTGGCTGAAGGGGAGATTCTCGATGTCAGGAATCT
GCGTATATCCTTTGGTGCGATGGAAGTGGTACAGGGAGTCAGCCTGCGATTGCAGCGGGGGCAGACCCTGGCCCTGGTGG
GGGAGAGCGGTTCCGGCAAATCGGTGACCGCGCTGTCGCTGCTGCGACTTCTGCCTCAAGGAGCCTCCGTTGATCCGGGG
AGTTCCATTGTGGTCAGCGGCCAGCCAGTGCTGTCTCTGACTCCCCGTCAGCTGCGTCAGCTGCGGGGCGGTTCCGTGGG
TATGATCTTTCAGGAACCCATGACTTCCCTGAACCCTCTGCACACCATCGAAAAGCAGATCGGCGAAACCCTGCAGCTGC
ACCGTGGCGTCAGTGGCCGGGCGCTTCGTGAACAGGTGCTGGCCCTGCTGGAAGAGGTGGGTATCGACAATGCTGCCAGA
CGCATGGGTGCTTTCCCCCATGAGCTTTCGGGAGGGCAGCGGCAGCGGGTGATGATCGCCATGGCCCTGGCCAACGATCC
CGCGTTGCTGATCGCAGATGAGCCCACCACCGCCCTGGATGTTACGGTGGCCAGCCAGATCCTTGAGCTGCTGAAACGCC
TGCAGCGCAAGCGTCACATGGCTATACTCCTGATTACCCATAACCTGGGCATCGTGCGCCGTTACGCGCACCAGATCGCG
GTGATGCAGACGGGCCGGATCGTGGAGCAGGGCACGTGCACGGAAATATTCACGTCGCCGCGCCATTGCTGCACCCGCAT
GCTGCTGGATGCCGAACGTCACCATCCGCCGGTACCGGTGGTGGCTGGCGCGTCGGAGCTTCTGCGGGTGGAGGATCTGC
GGGTATGGTTCCCCATCAAAAAGGGTATCTGGCGGCGTACGGTGGATCATGTGCGCGCCGTGGACGGGGTCAGTCTGCGT
GTGGCCAGGGGCGAAACCCTGGGGATTGTCGGCGAAAGCGGATCGGGCAAGACGACCCTGGGCCTGGCGCTGCTGCGGCT
GCTGCCCGCCAGTGGCGAGATCCACTTTGATGGCCACGCCCTGCACGCGTTAAAACACAAGGCCATGCGCCCGCTGCGCC
GCGCTGTTCAGGTGGTGCTGCAGGACCCCTACGGCAGCCTCAGCCCGCGAATGAATGTGGCCCAGATCCTTGAAGAAGGG
CTGCTGGTGCATGGGTTCAGTGTCAGCGAGCGCCGGGAGCTGGTGCAATGGGCGCTGCAGGAAGTGGGCCTGGATGTGGC
CATGCTGGAGCGCTATCCCCACGAGTTTTCCGGTGGGCAGCGCCAGCGCATTGCCATCGCCCGCGCACTGGTGCTCAACC
CCCGCCTGCTGGTGCTGGATGAGCCCACTTCGGCTCTGGATCAGAGCACCCAGGCCCAGGTCATGGCCCTGCTGCGCCAG
CTGCAGGCAAAGTACGGGCTGACCTACCTGTTTATCAGCCACGACCTTGGTCTGATCCGCTCCATCAGCCACCAGGTGCT
GGTGATGAAGGATGGCCGGGCGGTGGAGCAGGGTTCCACGGAAGCCATCTTCGCGGAACCACGCCACCCCTACACCAGAC
AGTTGATGCAGTCGGCATTGACTGTCTGA

Protein sequence :
MTPLTHEDTEKDSVNLAEGEILDVRNLRISFGAMEVVQGVSLRLQRGQTLALVGESGSGKSVTALSLLRLLPQGASVDPG
SSIVVSGQPVLSLTPRQLRQLRGGSVGMIFQEPMTSLNPLHTIEKQIGETLQLHRGVSGRALREQVLALLEEVGIDNAAR
RMGAFPHELSGGQRQRVMIAMALANDPALLIADEPTTALDVTVASQILELLKRLQRKRHMAILLITHNLGIVRRYAHQIA
VMQTGRIVEQGTCTEIFTSPRHCCTRMLLDAERHHPPVPVVAGASELLRVEDLRVWFPIKKGIWRRTVDHVRAVDGVSLR
VARGETLGIVGESGSGKTTLGLALLRLLPASGEIHFDGHALHALKHKAMRPLRRAVQVVLQDPYGSLSPRMNVAQILEEG
LLVHGFSVSERRELVQWALQEVGLDVAMLERYPHEFSGGQRQRIAIARALVLNPRLLVLDEPTSALDQSTQAQVMALLRQ
LQAKYGLTYLFISHDLGLIRSISHQVLVMKDGRAVEQGSTEAIFAEPRHPYTRQLMQSALTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-83 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-83 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-83 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-83 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-98 42