Gene Information

Name : Selin_1098 (Selin_1098)
Accession : YP_004112389.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1199205 - 1200629 bp
Length : 1425 bp
Strand : -
Note : TIGRFAM: pyruvate kinase; KEGG: chl:Chy400_3375 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta

DNA sequence :
ATGCGCAAAACCAAGATAGTTGCCACCATAGGTCCAGCTTCGAACTCAAAAGAGGCTATAACCAGCCTGATCCGCGCTGG
TCTGAGTGTCGCGCGCCTGAACTTCTCCCACGGCACCCACAGCGATCACGCGGAGGTGATCCGCACGATCCGTGAAGTTT
CCACGGAAATGGGCATTCCCGTCGCCATCCTGCAGGATCTTCAGGGGCCCAAGATGCGCACCGGAAAACTCAGGGACGCC
ACGCCAGTGGAACTGCGGGTCGGCCAGACATTCACCATCACCATAGACGATATCATCGGCGACAATGAACAGGTCAGCAC
CACCTACACCCCCCTGCCGCGGGATGTCAAGAAGGGCGATCGCATTCTCCTCTCCGATGGCCTGATCGAGCTGCGGGTTA
TCTCCGCCGACGACCGGAGTGTGCAGACAGAAGTACTCAACGGCGGTACCCTGGCAGAGAAGCAGGGTATCAATCTGCCG
GGAGTTCAGGTCAGTATCCCGGCCATCACGGAAAAGGATTACGAGGACCTGTGCTTCGGGCTGGAACAGGAGGTGGACTA
CATAGCCCTCTCCTTTGTGCGTTCCGCCACCGATGTACAGGAACTCAAGACCATCATCGCCGGCAAGGGCAAAAATACCC
CCATAATCGCCAAGATAGAAAAGCCTGAAGCTGTTGACCGCATGGAGGAGATTCTCTCCATCGCCGACGGCATCATGGTG
GCGCGGGGAGACCTGGGTGTTGAACTTCCGCCGGAGCAGGTTCCCCTTATCCAGAAGCGCATTATCCACATGGCCAATGC
GCGCGCGATCCCGGTGATAACGGCAACGCAGATGCTGGAGTCCATGATAAACAATCCACGGCCCACCAGAGCTGAAGCCA
GTGATGTGGCCAACGCTATCCTGGATGGCAGCGACGCGGTGATGCTCAGTGGCGAAACGGCACGGGGAAAATACCCTGTG
GATGCCGTGCGCATGATGGCGCGTATCGCAACCGAAGTGGAGCGGGGTATGCTGCAGGATCACGCCCTGCGTCTTGAGGC
CATGAACTTTGCCGATGTGGACGCCGTTCCCCACGCGGTTGGTGGCGCCATTGAAGCTATTTCCAACCGGCTTCCCATCA
AGGCGGTCTGGGTGTATACCCAGAAGGGTGGTACTGCCCGTCTGGCCTCACGCCACCGGCCCCGCATTCCCGTACTGGCC
TTCACTCCCCATGTCAGCCTGTACAGGCGATTGAGCCTGCTCTGGGGTATTCATCCCGTACTTATCGAACCCGTACACTC
CATTGAGGAGCTGATGGAGAGCGCGCGGCGCATCTCGGAGTATCGCGGCGTGGTGAAAACCGGCGACAAGGTCATTATCA
CCAGCAGCTACCCCTTCGAGCACCACGGCGAGAGCAACTTTCTGCAAATCATTACCCTGGATTGA

Protein sequence :
MRKTKIVATIGPASNSKEAITSLIRAGLSVARLNFSHGTHSDHAEVIRTIREVSTEMGIPVAILQDLQGPKMRTGKLRDA
TPVELRVGQTFTITIDDIIGDNEQVSTTYTPLPRDVKKGDRILLSDGLIELRVISADDRSVQTEVLNGGTLAEKQGINLP
GVQVSIPAITEKDYEDLCFGLEQEVDYIALSFVRSATDVQELKTIIAGKGKNTPIIAKIEKPEAVDRMEEILSIADGIMV
ARGDLGVELPPEQVPLIQKRIIHMANARAIPVITATQMLESMINNPRPTRAEASDVANAILDGSDAVMLSGETARGKYPV
DAVRMMARIATEVERGMLQDHALRLEAMNFADVDAVPHAVGGAIEAISNRLPIKAVWVYTQKGGTARLASRHRPRIPVLA
FTPHVSLYRRLSLLWGIHPVLIEPVHSIEELMESARRISEYRGVVKTGDKVIITSSYPFEHHGESNFLQIITLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 9e-80 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-80 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-80 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-79 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selin_1098 YP_004112389.1 pyruvate kinase VFG0479 Protein 3e-80 44