Gene Information

Name : Selin_1057 (Selin_1057)
Accession : YP_004112348.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1146030 - 1146710 bp
Length : 681 bp
Strand : +
Note : KEGG: hap:HAPS_1662 lipoprotein-releasing system ATP-binding protein LolD; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGACTGACCCCATGACCCCGAATCAACAGCCAATTCTGCAGGGCCGCCAGCTGGCGCGCCTCTACCATATGGCCGGCCA
GCACTCCGTCAGGGTACTTGGCGGTCTGGATATCGACATTCTGCCCGGTGAACTGGTGGCCATCACGGGGAAGAGCGGCA
CCGGTAAATCGACGCTGCTGCACCTGCTGGGGGGGCTGGATCGCCCCGATGAAGGCGAGGTGTTTTTCCGCGGCGAATCC
CTGAAGGGTGCCAGTGAGAATTTTCTGGCCCGTTACCGGGCGGAGCATATTGGTTTCGTCTTTCAGTTTCACCATCTGCT
CAGTGATTTCAACGCCCTGGAAAATGTGCTGATGCCCATGACCATTGCCGGACAGCGGGACAGTCAGCGGGGGCGTCAGC
TTCTTGAACAGGTGGGCCTCGGGCATCGCTGGAATCATTACTCTTCAGAACTCTCCGGTGGCGAGCAGCAGCGGGTGGCC
ATTGCCCGTGCCCTGGCCAACCGGCCCAGTGTGCTGCTGATGGATGAGCCGACGGGGAATCTTGACGAGGAGAATTCGGC
CCATATTCTGGATATCCTCCAGACCATCAGGCGTGAAGAGGGCACCACCATTGTCATCGTCACTCACAGTCTGCAGCTGG
CGAGTCAGTGCGAGCGCAACCTGGTGATCGGAGCCCTCTGA

Protein sequence : 
MTDPMTPNQQPILQGRQLARLYHMAGQHSVRVLGGLDIDILPGELVAITGKSGTGKSTLLHLLGGLDRPDEGEVFFRGES
LKGASENFLARYRAEHIGFVFQFHHLLSDFNALENVLMPMTIAGQRDSQRGRQLLEQVGLGHRWNHYSSELSGGEQQRVA
IARALANRPSVLLMDEPTGNLDEENSAHILDILQTIRREEGTTIVIVTHSLQLASQCERNLVIGAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Selin_1057 YP_004112348.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-35 48
Selin_1057 YP_004112348.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-36 45
Selin_1057 YP_004112348.1 ABC transporter-like protein NC_012469.1.7686946. Protein 4e-22 41
Selin_1057 YP_004112348.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-25 41