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Name : Rpdx1_0864 (Rpdx1_0864) Accession : YP_004107229.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : DEAD/DEAH box helicase Function : - COG functional category : R : General function prediction only COG ID : COG1204 EC number : - Position : 921905 - 925414 bp Length : 3510 bp Strand : - Note : KEGG: sjp:SJA_C1-03600 putative helicase; PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase DNA sequence : TTGGAGACGATTGACGAACTGACCACCTTCCTGACGACCGCGACTGTCGACGGTATCCTTGGGCGCCTCCTCTATCGCGG CGCGGCTTGGTCGCTGATGCGCGAGGACGGCGTGTTGCCACCGAATGCGCCGCCGCTGGGCGCGACAATCGAAACCGATC TTGCCGAACACGGCTTCGCCCTGCTTAGGGGTGCGATGGCCCTGCGTGCTCAGGCTGGCGCATCGGATTTGACCAGCAAG GCGTTCGAGCGCGCTGCCAACGCCTTCGAAGCCCTCGTTCGCAACGGCGATCCGGAGTCGCCAGATCGTGGCTTCCGTCG CACCATAGCCGCCGCAGCCTATCACCTCGCCGGCTTCTCAGCCGTCGCCTATTCGCTATTCAACGAGATTGCGGACGATC TCAATGCCTCGCCGGGCGAGACGGCGATCCAACACCTGATCCTGCGCGATCTCGGCCAATTGCGCGGCTTCGTTCGCGAA TGGCTGGATGACGAAGCTCACGACGATGAGCAGATCGCCGAGTCGCTGCGGGGTGAAGAGCCTGACGTCGATGACGCGCT GTCAACCATCCTCAACACGACGATCTGCCGGGCGCTGGCGCATTTTGATCTCGCGCTCGAGACGGGCGAACCCGAGCCAA TCGAGACCGCGCGGACGTTGCTCGCCACCGCAGTCAGGTTGGCGGACAATGCGGAAAATGTTCCGCTGTGGTGGATCTCG AACATTTGCCGTCACCTCATCGACGATCTCTGGCAGCATTCCCTGCACCAGAATTTGCCGACCGAGCCGCCAGAGGGAAC GGAGGAAAAATACCCGGACCTGCGCCGGCTGTTCATCTCGTCGCTTTACGCACGCAAGACTTCCGAGGTGGAGCTATGGC CATCGCAGCGCGAAGCGGCCCAGCGTTCCACCGACGTCACTGACGACCTTGTCGTCGCCTTGCCGACCAGCGCCGGAAAG ACGCGGGTGGCCGAGATCGCCGCGCTGATGACCCTGTCGTCGGCTCGCCGAGTGCTGATCGTCACGCCGCTGCGCGCTCT GTCAGCGCAGACCGAGCGATCCTTCAGAAAGACCTTCGCCCCCCTCGGCTTCAGCGTCTCGTCGCTTTACGGCGCCAGCG GCCTTTCGGCCGGCGATGAAGACGCGCTGCGAACCCGTGAGATCATCATCGCAACGCCGGAGAAGCTCGATTTCGCCCTG CGAAGCGACCCATCGCTGATCGATGATGTCGGCCTTATCGTCCTCGACGAAGGCCACATGATTGGTCCGAGCGAGCGTGA GATCCGCTACGAGACGCTGGTGCAACGCTTGCTCCGGCGCGCGGACGCGGGCGAACGTCGGATTGTCTGTCTCTCCGCGA TCCTGCCCAGCGGCGACGAACTGGACGATCTGACCGCATGGATACGCTCCGACGAACCCGGCGAGCCCGTGCTTTCCGAC TGGCGCCCCACGCGCCAGCGGTTCGGCGCACTCACCTGGCGGGGCAAGGATGCGCTTCTTCGGCTCGATCTCGACGACGA TGGTCCGTTCCTCGACAAATTCGTCGTGCAGAAACCGGCACGGGGTAAGGAGAAGAAGCCCTATCCGCGCAAGAACTCCC ATCTCGCCTTGTTCGCCGCATGGGAGTTCGCGGGCCAGGGCAAGCGGACCCTGATCTTCTCGACCCAGGCGAATTGGGTC GAGGGCTATGGCAAACAGATCGTGGACCTCTGCAAGCGCGGCTATTTGGACTCGCTGCTGGAGGATGAGGCGTCGATCGC CCGCGCTCTGGAGGTCGGCAAGGAGTGGTTGGGTGAAGACCATCCCGCCGTCGCCTGCCTGAAGGCGGGCGTTGCCATTC ACCACGGCCGGCTGCCGAGCCCGTTTTTGCGTGAGCTGGAAGTCCTGCTGTCAGAAGGTGTCCTGAAGGTCATCGTCGCG TCGCCGACGCTCTCGCAGGGTCTCAATCTCAACGCCGCCGTGCTCTTGGTGCCTGCGTTGTATCGTGCCGGCGAGAAGAT CAAAGGCGAAGAGTTTGCGAACGTTGCCGGTCGAGCCGGACGCGCCTTCGTCGACGTCGAGGGACTCATTGTCCACGTCA TGTTCGACAATATTAACTGGCGAAAAAAAGAATGGGGCAAGCTGGTTGCCTCCGCCAAAGCTCGCACGCTGAAAAGTGGC CTCATCCAGATCGTCGCCGAGATTCTTGAGCGGCTGTCCCGCGAAGGTGTTCTGGATCGTGACGATGCCTGGGAATATCT CGCCAATGCACGCGAAGCTTGGAGGTCGCCGGAGGAGGAAGCATCTGTGGCCGAGCGCTTGGCTGCTGCAAGACAGAATG ATGGCGATGTCGCTCATGACGACGACGGAGAAGATGATGATGACGATGCGGAAGAGACCATCGAAGAGGAGCCTCTGTCG CAGATAGTCGAACGTCTAGACGCGACTGTGTTTGGACTCATTGAAGCGCTCGATTCTGATCGGGCCGATTTGCCGAAGCT TTTGGACGAGGCCCTCAGAGGATCACTTTGGGCTCGTCAGATCGCCCGCGAAGACGAAGACGTAGCCCCTCTGCACAAGC GAGTAATCGAGGCGCGTGCTGATCTCATCTGGAAGACGACCACCGCATCGGCCCGGCGCGGTCATTTCGCCATGGGTGTT GGACTGGAAGCAGGCCTTGCAATTGATGCCATGGCTGACGTGTTGGCCGAACTCCTCGACCGCGCAGACGTAGCGGCGCT GAGCGGCGATATTGATGAACTAGTCGAGACCCTTGGCGGCCTTGGAGAGCGGCTTTTGTTCATGCGGCCGTTCATCCCCA GCAAGAACAACGCGTTGCCTGCGAATTGGAAGGCAATCCTGCATAGTTGGGTGTCGGGCGAGGATGTGGCCAAGATCGGG CCTCAGAACATGCGGGCCGTCGAAGAGGCCTTCACCTACCGTTTGGTTTGGGCGCTGGAGGCTGTCCGCACACGCCGCAT GTCTCTCGGGTGGTCGCCAGACACGGTGGCGGGCGGTGCCGCGGCGGCGGTAGAAACCGGCGTCCCGCAATTCATGATGT CGATGCTGATTCGCGCGGGCCTGCCATCACGACGTGCGGCTATGGCGGCGATCGAGGACGCCAAGCCTATTTTCGTCACG CCCGCCGAGATGCGGGCCTGGCTCGAATCCGACGAGATCACAGCCTACACGGACGCTGGCGACTGGCCGACACCGGACAC CGCCGCCCTATGGGCGCGGTTCCGAACCGAAGCCCTCAGCGGCGGCATCCAGAAATGGTCGGTCGAACACTACAAGCGTC TTCTCGACACCGCGGCTGCTCCGCCTGCCGGCCTCTATCGGATCGTCACCGACGAGGGCGATGGGCGGACCTGGCTGGTC ACGCCCGACTATCAGCGGGTTGCCGCGTTCAAGAAGCCGGCTGTCGATCCCAAGCCCAGCCTCTTCTCGGGCCGATCGCC GGGTAACACGAGGCTAGTGGAAGCCTTGCGCGTCGGCCGCGGGAAACTGCGCTGGCCAAGCGCAGACTAG Protein sequence : METIDELTTFLTTATVDGILGRLLYRGAAWSLMREDGVLPPNAPPLGATIETDLAEHGFALLRGAMALRAQAGASDLTSK AFERAANAFEALVRNGDPESPDRGFRRTIAAAAYHLAGFSAVAYSLFNEIADDLNASPGETAIQHLILRDLGQLRGFVRE WLDDEAHDDEQIAESLRGEEPDVDDALSTILNTTICRALAHFDLALETGEPEPIETARTLLATAVRLADNAENVPLWWIS NICRHLIDDLWQHSLHQNLPTEPPEGTEEKYPDLRRLFISSLYARKTSEVELWPSQREAAQRSTDVTDDLVVALPTSAGK TRVAEIAALMTLSSARRVLIVTPLRALSAQTERSFRKTFAPLGFSVSSLYGASGLSAGDEDALRTREIIIATPEKLDFAL RSDPSLIDDVGLIVLDEGHMIGPSEREIRYETLVQRLLRRADAGERRIVCLSAILPSGDELDDLTAWIRSDEPGEPVLSD WRPTRQRFGALTWRGKDALLRLDLDDDGPFLDKFVVQKPARGKEKKPYPRKNSHLALFAAWEFAGQGKRTLIFSTQANWV EGYGKQIVDLCKRGYLDSLLEDEASIARALEVGKEWLGEDHPAVACLKAGVAIHHGRLPSPFLRELEVLLSEGVLKVIVA SPTLSQGLNLNAAVLLVPALYRAGEKIKGEEFANVAGRAGRAFVDVEGLIVHVMFDNINWRKKEWGKLVASAKARTLKSG LIQIVAEILERLSREGVLDRDDAWEYLANAREAWRSPEEEASVAERLAAARQNDGDVAHDDDGEDDDDDAEETIEEEPLS QIVERLDATVFGLIEALDSDRADLPKLLDEALRGSLWARQIAREDEDVAPLHKRVIEARADLIWKTTTASARRGHFAMGV GLEAGLAIDAMADVLAELLDRADVAALSGDIDELVETLGGLGERLLFMRPFIPSKNNALPANWKAILHSWVSGEDVAKIG PQNMRAVEEAFTYRLVWALEAVRTRRMSLGWSPDTVAGGAAAAVETGVPQFMMSMLIRAGLPSRRAAMAAIEDAKPIFVT PAEMRAWLESDEITAYTDAGDWPTPDTAALWARFRTEALSGGIQKWSVEHYKRLLDTAAAPPAGLYRIVTDEGDGRTWLV TPDYQRVAAFKKPAVDPKPSLFSGRSPGNTRLVEALRVGRGKLRWPSAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAP70293.1 | helicase-like protein | Not tested | HPI | Protein | 1e-151 | 41 |
