Gene Information

Name : Rpdx1_0774 (Rpdx1_0774)
Accession : YP_004107142.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 821952 - 822731 bp
Length : 780 bp
Strand : -
Note : KEGG: nwi:Nwi_3049 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAGTGCCGCCTTCCTCACCGCGCGCGACCTCGCCGTCTCGCTCTCCGGCCGCGACGTGCTGCGCGGTGTCTCGCTCGA
TCTGACCCGCGGCCATCTGGTGGCACTGGTCGGACCGAACGGCGCCGGCAAGACCACGCTGCTGCGCGCCCTCGCCGGCC
TGATCGAGTCGCAGGGCGAGATCACCATCGGCGGCGATTCGCTGGCGAGCTTGGCGCTGCGCGAGCGCGCCAAGCGGTTC
GGCTATCTGCCGCAGGGCCATCTGGTGCATTGGCCGCTGCCGGTGCGCGACGTTGTTGCGCTGGGGCGGTTTCCACACGG
CGCCACAGATCCGGCCTGGCTGTCGCCGCTGGATGCGGAGGCGGTCGATCGGGCGATGGCGGTCACCGACGTCACCCAGT
TCGCGGACCGCATCGTCACCGAACTGTCGGGCGGCGAACGCAGCCGGGTGGCGCTCGCCCGCGTGCTGGCGCTGGAGGCG
CCGGTGGTCCTCGCCGACGAGCCGACCGCCTCGCTCGATCCGCGCTATCAGCTCGACGTGATGCAGACCTTGCGCACCAC
CGCCGATGCCGGCACGCTGGTGATCGTCGTCACCCACGATCTGGGGAGCGCCGCCCGGTTCGCCGACACCGTGCTGGTGA
TGGCGAGCGGCGCACTAGCGGCTCACGGAACGCCCAACGACGCGCTGTCGGACGAGATCATGCAGCAGGTGTTTCGCGTC
AGCGCCTACCGGGCGCAGTATCAGGACAGCGGCGTGATCCTGCCGTGGTCCGGAACCTGA

Protein sequence : 
MSAAFLTARDLAVSLSGRDVLRGVSLDLTRGHLVALVGPNGAGKTTLLRALAGLIESQGEITIGGDSLASLALRERAKRF
GYLPQGHLVHWPLPVRDVVALGRFPHGATDPAWLSPLDAEAVDRAMAVTDVTQFADRIVTELSGGERSRVALARVLALEA
PVVLADEPTASLDPRYQLDVMQTLRTTADAGTLVIVVTHDLGSAARFADTVLVMASGALAAHGTPNDALSDEIMQQVFRV
SAYRAQYQDSGVILPWSGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpdx1_0774 YP_004107142.1 ABC transporter-like protein BAC0164 Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpdx1_0774 YP_004107142.1 ABC transporter-like protein VFG1042 Protein 9e-29 41