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Name : Rpdx1_0537 (Rpdx1_0537) Accession : YP_004106910.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 573176 - 574159 bp Length : 984 bp Strand : + Note : KEGG: nha:Nham_0488 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein DNA sequence : GTGCAGCCCGAGTCGGAAGCTCAGGCCGCTCCGCTCCGCCCGACCTCGTATTCCGACGCCGGGCTGACCGAGCTGTTCCT CGACATGATCGCGGCCGAGCAGGGCGCCTCCGCCAACACGCTCGACGCCTATCGGCGCGATCTGGCCGACCTGTCGCACT TTCTCTCCCGCCGCCGGCTCAGCATCGGGGCTGCCGACACCGCGGCGCTGCGCGGCTATCTGGCGGACCTCGACAAGCGG GGCTTCGCCACTTCCAGCGTTGCCCGTCGGCTGTCGGCGCTGCGGCATTTGTTCCGGTTTCTGCTCAGCGAACGGATTCG CGCCGACGATCCGGCCGCGATCCTGGCCGGGCCGAAGCGCGGTCGCAGCCTGCCCAAGGTGCTGTCGATTGCCGATGTCG ACCGGCTGCTCGCTTGCGCCCGCCAGGAGGCCGACGCCGCAGAGGGAGCCGCGCGGCTGCGTGCGGCCCGGCTGAATTGT CTGCTCGAAGTGCTGTACGCGACCGGCCTGCGTGTCTCCGAGCTGATGGCGCTGCCACTGTCGGCGGCCCGGCGCGACGC CCGGATTATCGTGGTGCGCGGCAAGGGCGACAAGGAACGGCTGGTGCCGCTCAATGCCGGCGCCAAGCAGGCGATGGCGC GTTATCTCGAAGAAGTCGCGGCTGTCGCCAAAGACCCCAAGGGCGCCTCCTCGAAATGGCTGTTTCCGTCCTTCGGCGAC AGCGGACATCTCACCAGGCAGCATTTTGCAAGGGATCTGAAGGATTTGGCAGCACGCGCCGGGCTGTCGCCGCGGCTGGT CAGTCCACACGTGCTGCGCCACGCCTTCGCCAGCCATTTGCTGCACAACGGCGCCGATCTGCGCATCGTGCAAACGCTGC TCGGCCACAGCGATATCTCGACCACCCAGATCTACACCCACGTGGTCGAGGAGCGTTTGAAGAGTCTGGTGCGCGACCTG CACCCTTTGTCCAACCGGTCCTGA Protein sequence : MQPESEAQAAPLRPTSYSDAGLTELFLDMIAAEQGASANTLDAYRRDLADLSHFLSRRRLSIGAADTAALRGYLADLDKR GFATSSVARRLSALRHLFRFLLSERIRADDPAAILAGPKRGRSLPKVLSIADVDRLLACARQEADAAEGAARLRAARLNC LLEVLYATGLRVSELMALPLSAARRDARIIVVRGKGDKERLVPLNAGAKQAMARYLEEVAAVAKDPKGASSKWLFPSFGD SGHLTRQHFARDLKDLAARAGLSPRLVSPHVLRHAFASHLLHNGADLRIVQTLLGHSDISTTQIYTHVVEERLKSLVRDL HPLSNRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 2e-35 | 41 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 2e-35 | 41 |
