Gene Information

Name : Rpdx1_5004 (Rpdx1_5004)
Accession : YP_004111277.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5386500 - 5387165 bp
Length : 666 bp
Strand : -
Note : KEGG: nha:Nham_1885 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence : 
ATGCGGGTGCTGGTGGTCGAGGACGACAGCCGGATCGCGTCGGAGCTGGGGCGCGGCCTCGGCGAGGCCGGCTACCTCGC
TGAAATCGTCGGCGACGGCGAGGAGGCGTGGTTTCGCGGTGACACCGAGGACTATGCCGCCATCATCCTCGACCTCGGCC
TGCCGGGCCTCGACGGCCTCACCATCCTGAAGCGCTGGCGCGACAACGGACGCCTCACCCCGGTGCTGATCCTCACCGCG
CGCGGAAGCTGGGCCGAACGGGTCGACGGCATCGATGCCGGCGCCGACGATTACCTGCCGAAGCCGTTCCAGATGGAGGA
GCTGCTGGCGCGGCTGCGCTCGATCGTGCGGCGGTCGGCCGGCCACGCGTCGTCGGTCGTCAGCATCGGCGATGTCACGC
TCGACGAGCGCCAGATGCAGGTCAGCGTCCGCGGCAAGCCGGTGGCGCTGTCGCCACTGGAGTACCGGCTCGCATCCTAC
CTGGTGCTGCATCGCGGCCGGGTGGTGTCGCAGTTCGAGCTGGCCGAGAACATCTACGGCCAGGACGACGCCCACGATTC
CAACGCCATCGAGGTGCTGGTGGGCCGCGTTCGCCGCAAGATCGGGGTCGACCTGATCGAGACCCGTCGCGGCTTCGGCT
ACATCGTGGCGGACGAGCGTTCATGA

Protein sequence : 
MRVLVVEDDSRIASELGRGLGEAGYLAEIVGDGEEAWFRGDTEDYAAIILDLGLPGLDGLTILKRWRDNGRLTPVLILTA
RGSWAERVDGIDAGADDYLPKPFQMEELLARLRSIVRRSAGHASSVVSIGDVTLDERQMQVSVRGKPVALSPLEYRLASY
LVLHRGRVVSQFELAENIYGQDDAHDSNAIEVLVGRVRRKIGVDLIETRRGFGYIVADERS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpdx1_5004 YP_004111277.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 6e-35 45
Rpdx1_5004 YP_004111277.1 winged helix family two component transcriptional regulator BAC0487 Protein 2e-28 45