Gene Information

Name : Rpdx1_4951 (Rpdx1_4951)
Accession : YP_004111225.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5324089 - 5324748 bp
Length : 660 bp
Strand : -
Note : KEGG: met:M446_0136 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence : 
ATGCGAATTCTGGTGGTCGAGGACGATGCGATGATCGCGGACGGCATCCGTGCCGGGCTGTCGCTCGCCGGCGCCAGCAT
CGACTGCGTCAGCGGTTGCGAAGACGCCCGTGCGGCGCTGGCGGCGAACGAATTCTCGGCCGTCGTGCTCGACATCATGC
TGCCGGACGGCAGCGGCGTCGATCTGCTGCGCGCCATCCGTGCCGCCGGCGACACGACCCCGGTGCTGCTGCTGACCGCG
CTCGACGAAACGCCCGACCGCATCGCCGGTCTCGACGCCGGCGCCGACGATTATCTCGGCAAGCCGTTCGATCTCGATGA
ACTGTCGGCGCGGCTGCGCGCGATCATCCGCCGCCGCGACGGCCGCGCAGCCACCTGCCTCGAACACGGTCCGGTCCGGC
TGTATCCGGCGGAAGGCAATGCCACGCTGGACGGCGTATCGGTGGCGCTGTCGCGCCGGGAATTTGCCGTGCTGCACGCG
CTGATGGAGCGGCCCGGCGTGGTTCGCTCGCGCGCCGAACTCGAGGAGCGGCTGTACGGTTGGGGCGACGAAGTCGACAG
CAACGCGATCGAGGTCCACATCCACAATCTCCGCGCCAAGCTCGGCCGCAGCGCGATCGAGACGATGCGCGGCCTAGGCT
ATCGGATGGCGCCGCGATGA

Protein sequence : 
MRILVVEDDAMIADGIRAGLSLAGASIDCVSGCEDARAALAANEFSAVVLDIMLPDGSGVDLLRAIRAAGDTTPVLLLTA
LDETPDRIAGLDAGADDYLGKPFDLDELSARLRAIIRRRDGRAATCLEHGPVRLYPAEGNATLDGVSVALSRREFAVLHA
LMERPGVVRSRAELEERLYGWGDEVDSNAIEVHIHNLRAKLGRSAIETMRGLGYRMAPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-35 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpdx1_4951 YP_004111225.1 winged helix family two component transcriptional regulator BAC0487 Protein 5e-32 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpdx1_4951 YP_004111225.1 winged helix family two component transcriptional regulator VFG0473 Protein 7e-32 43
Rpdx1_4951 YP_004111225.1 winged helix family two component transcriptional regulator VFG1389 Protein 8e-18 41