Gene Information

Name : Rpdx1_4919 (Rpdx1_4919)
Accession : YP_004111193.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 5292807 - 5294204 bp
Length : 1398 bp
Strand : -
Note : KEGG: bja:blr1381 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase

DNA sequence :
ATGAGCAACAAAATGTGGGGCGGCCGATTCACCGATCGCCCCGACGCGATCATGGAAGAGATCAACGTCTCGATCGACGT
CGACCGCCATCTCTACGCCCAGGACATCGCTGCGTCCAAGGCGCATGCGGCCATGCTGGCCGCGCAGGGCATCATCACCG
CGAACGATGCGAAAAATATCGGCAAGGGTCTAGACACGATCTTGTCAGAGATCGGTGCCGGCAAATTCACCTTCAAGCGT
GCGCTCGAGGACATTCATATGAATGTCGAGAGCCGGCTCGCCGAGCTGATCGGCCCGGCCGCCGGGCGCTTGCACACCGC
GCGCTCGCGCAACGACCAGGTCGCGACCGATTTCCGGCTGTACGTCCGCGATGTGCTGGACGAGACCGATGCGGCGCTGG
CGGCGCTGCAGCAGGCGCTGGCGGAGCGGGCGCTCGAGCAGGCCGATACGGTGATGCCCGGCTTCACCCATCTGCAGACC
GCGCAGCCGGTGACCTTCGGTCATCATCTGATGGCCTATGTCGAGATGGTGGCGCGCGACCGCGGCCGGTTCCAGGATGC
CCGCAAGCGGCTCAACGAAAGCCCGCTCGGCGCCGCCGCGCTGGCCGGCACCTCGTTCCCGATCGACCGCCACGCCACCG
CCGCCAGGCTCGGCTTCGACCGGCCGATGGCCAATTCGCTCGATGCGGTGTCGGACCGCGACTTCGTGCTGGAGACGTTG
TCGGCGGCGTCGATCTGCGCCGTGCATCTGTCGCGCTTCGCCGAAGAGATCGTGATCTGGACCTCGCCGCTGGTCGGCCT
GATCCGGCTGTCGGACAAGTTCACCACCGGCTCGTCGATCATGCCGCAGAAGCGCAATCCGGACGCTGCCGAGCTGGTCC
GCGCCAAGACCGGCCGGGTGATCGGCGCGCTGAACGGCCTGTTGATCGTGATGAAGGGCCTGCCGCTCGCCTATCAGAAG
GACATGCAGGAAGACAAACAGGGCGCGATGGAAGGCTTCGCGGCGCTGTCGCTGGCGATCCGCGCGATCACCGGCATGGT
TCGCGACCTCGAGCCGGAACCGGAGCGGATGAAGGCGGCCGCGGGCGAGGGCTATGCCACCGCCACCGATCTGGCCGACT
GGCTGGTGCGGACGCTGAAGATGCCGTTCCGCGAGGCGCACCACGTCACCGGCCGGATCGTCGGCCTCGCCGCCAAGAAG
GGGGTGGCGCTGCACGAACTGCCGCTCGCCGAGATGCAGGGGATCGAAAAGCGCATCACCAAGGACGTGCTGGCGGTGCT
CAGCGTCGAATCCTCGGTCAAGAGCCGCACCTCCTACGGCGGCACCGCGCCGAAGAACGTCCGCAGCCAGGCCAACGCCT
GGCTCAAGCGGCTCGCCAAGGGCCGTAAATCTCGCTGA

Protein sequence :
MSNKMWGGRFTDRPDAIMEEINVSIDVDRHLYAQDIAASKAHAAMLAAQGIITANDAKNIGKGLDTILSEIGAGKFTFKR
ALEDIHMNVESRLAELIGPAAGRLHTARSRNDQVATDFRLYVRDVLDETDAALAALQQALAERALEQADTVMPGFTHLQT
AQPVTFGHHLMAYVEMVARDRGRFQDARKRLNESPLGAAALAGTSFPIDRHATAARLGFDRPMANSLDAVSDRDFVLETL
SAASICAVHLSRFAEEIVIWTSPLVGLIRLSDKFTTGSSIMPQKRNPDAAELVRAKTGRVIGALNGLLIVMKGLPLAYQK
DMQEDKQGAMEGFAALSLAIRAITGMVRDLEPEPERMKAAAGEGYATATDLADWLVRTLKMPFREAHHVTGRIVGLAAKK
GVALHELPLAEMQGIEKRITKDVLAVLSVESSVKSRTSYGGTAPKNVRSQANAWLKRLAKGRKSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 8e-96 51
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 8e-96 51