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Name : Rpdx1_4651 (Rpdx1_4651) Accession : YP_004110931.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 5001508 - 5004147 bp Length : 2640 bp Strand : - Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: bbt:BBta_1195 chaperone; SMART: AAA ATPase DNA sequence : ATGAACGTAGAAAAATACACCGAACGTGTGCGCGGCTTTATCCAGTCGGCGCAGTCGCTTGCTGTCCGCGAGGGGCATCA GCAGTTCTCGCCGCTGCATATTCTCAAAGTTCTGCTCGACGATTCCGAAGGGCTCGCGGGCGGTCTGATCGACCGCGCCG GTGGCAATTCGCGCGCGATCCTGAAGGCGACCGAAGACGCACTCGGCAAAATGCCGAAGGTGTCCGGCTCGGGCGCCGGC CAAGTCTATCTCGATCCGGCCACCGCGCGGGCGTTCGACGCTGCCGAGAAGGCGGCCGAGAAGGCGGGCGACAGCTTCGT CACCGTCGAACGGCTGCTGCTGGCGCTGTCGCTGGACAAGGACAGCGAGGCCGGCAAGCTGCTCGCCAAGGGCGGCGTCA CCCCGCAGAACCTCAACGCCGCCATCAACGCCCTGCGCAAGGGCCGCACCGCGGATTCGGCGACGGCCGAGAACGCCTAT GACGCGCTGAAGAAATACGCCCGCGACCTGACCCAGGCGGCGCGCGACGGCAAGCTCGACCCGGTGATCGGCCGCGACGA GGAGATACGCCGCACCATCCAGGTGCTGTCACGGCGCACCAAGAACAACCCGGTGCTGATCGGCGAACCCGGTGTCGGCA AAACCGCGATCGTCGAGGGGCTGGCGCTGCGCATCCTCAACGGCGACGTGCCGGAGAGCCTGAAGGACAAGAAGCTGCTG GCGCTCGACATGGGCGCTCTGATTGCGGGTGCGAAGTATCGCGGCGAGTTCGAGGAGCGGCTGAAGGCCGTGCTCAACGA GGTCACCACGGCCGAGGGCGGCATCATCCTGTTCATCGACGAGATGCACACCCTGGTCGGCGCCGGCAAGGCCGACGGCG CGATGGACGCGTCGAACCTGCTGAAGCCCGCGCTCGCCCGCGGCGAGCTGCATTGCATCGGCGCGACCACGCTCGATGAG TATCGCAAGCACGTCGAGAAGGACGCCGCTTTGGCGCGGCGCTTCCAGCCGGTGTTCGTCAACGAGCCGACGGTCGAGGA CACCATCTCGATCCTGCGCGGGCTGAAGGACAAATACGAGCAGCACCACGGCGTGCGCATCGCCGACTCGGCGATCGTCG CCTCGGCGACGCTGTCGAACCGCTACATCACCGACCGCTTCCTCCCCGACAAGGCGATCGACCTGATGGACGAGGCCGCG GCGCGGCTGAAGATGCAGGTCGACTCCAAGCCGGAAGAGCTGGATTCGATGGACCGCGAGATCGTGCGGCTGAAGATCGA GCAGGAAGCGCTGAAGAAGGAGAGCGACGTCGGCTCCAAAACCCGCCTGGTGGCGCTGGAGAAGGAGCTCGCCGAGCTCG AGGAGAAGTCGGCGGTGCTCACCCAGCGCTGGAGCGCGGAGAAGAACAAGCTCGCGGGTGCCCAGAAGCTGAAGAGCGAA CTCGACGGCCTGCGGATCGAACTCGCCAATGCGCAGCGTCGCGGTGAATATCAGCGCGCCGGCGAACTGGCCTATGGCCG GATTCCCGAGCTGGAAAAGAAGCTCGCGGACATCGAAGCCCACGAGAACGCCGGCGAGATGGTGGAGGAGGCGGTCACCG CCGACCACATCGCGCAGGTGGTGTCGCGTTGGACCGGCGTGCCGGTCGACAAGATGCTCGAAGGCGAGAAGGAAAAGCTG CTGCGGATGGAAGAGCAGCTCGGCCAGCGTGTGGTCGGGCAGTTCGAGGCCGTGCACGCGGTCTCGACCGCGGTGCGCCG CGCCCGCGCCGGCCTGCAGGACCCGAACCGGCCGATGGGCTCGTTCATGTTCTTAGGGCCGACCGGCGTCGGCAAGACCG AGCTGACCAAAGCGCTCGCCGAATATCTGTTCGACGACGAGACAGCGATGGTCCGCATCGACATGTCGGAATTCATGGAG AAGCACTCGGTGGCCCGGCTGATCGGCGCACCTCCCGGCTATGTCGGCTATGACGAAGGCGGCGTGCTGACCGAAGCGGT GCGGCGCCGGCCGTATCAGGTGATCCTGTTCGACGAGATCGAAAAGGCGCATCCGGACGTGTTCAACGTGCTGCTGCAGG TGCTCGATGACGGCCGTCTCACTGATGGACAAGGCCGCACCGTGGACTTCCGCAACACGCTGATCGTGATGACCTCCAAC CTCGGCTCCGAGTATCTGGTCAATCAGCCCGAGGGCGAGGACACTGGCGCGGTGCGCGAGCAGGTGATGGGAATGGTGCG GGCGCACTTCCGCCCCGAATTCCTCAACCGCGTCGACGAGATCATCCTGTTCCACCGCTTGCAGAAGAGCGAGATGGGCC GGATTGTCGACATCCAGTTCGCGCGGCTCACTAAGCTGCTCGAGGACCGCAAGATCGTGCTCGATCTCGACGCTGCGGCC CGCGACTGGCTGGCCGAAAAGGGCTGGGATCCGGCTTACGGCGCCCGCCCCTTGAAGCGGGTGATCCAGCGCAGCGTCCA GGACCCGCTCGCCGAGATGATCCTGGAAGGCTCGGTCAAGGACGGCGACCACGTCGCGATCTCAGCCGAAGGCGGCGTGC TGACCTTCAACGGCAAGCCGCCGCACAGCGCGGACATCGAGCCGTTCACGGGACGGCCGCCGAAGCGGATGCTGAACTGA Protein sequence : MNVEKYTERVRGFIQSAQSLAVREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGNSRAILKATEDALGKMPKVSGSGAG QVYLDPATARAFDAAEKAAEKAGDSFVTVERLLLALSLDKDSEAGKLLAKGGVTPQNLNAAINALRKGRTADSATAENAY DALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLL ALDMGALIAGAKYRGEFEERLKAVLNEVTTAEGGIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCIGATTLDE YRKHVEKDAALARRFQPVFVNEPTVEDTISILRGLKDKYEQHHGVRIADSAIVASATLSNRYITDRFLPDKAIDLMDEAA ARLKMQVDSKPEELDSMDREIVRLKIEQEALKKESDVGSKTRLVALEKELAELEEKSAVLTQRWSAEKNKLAGAQKLKSE LDGLRIELANAQRRGEYQRAGELAYGRIPELEKKLADIEAHENAGEMVEEAVTADHIAQVVSRWTGVPVDKMLEGEKEKL LRMEEQLGQRVVGQFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFME KHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSN LGSEYLVNQPEGEDTGAVREQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGRIVDIQFARLTKLLEDRKIVLDLDAAA RDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILEGSVKDGDHVAISAEGGVLTFNGKPPHSADIEPFTGRPPKRMLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-110 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpdx1_4651 | YP_004110931.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 2e-121 | 45 |
| Rpdx1_4651 | YP_004110931.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 4e-113 | 43 |
