Gene Information

Name : Rpdx1_0452 (Rpdx1_0452)
Accession : YP_004106826.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 490075 - 490821 bp
Length : 747 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO0408 oxidoreductase

DNA sequence :
ATGAACGACCGCGTCGTCATCATCACCGGAGGCAGCCGCGGCATCGGCCGTGCCACCGCGCTCGCCTGCGCCAGGCGCGG
CTTCAAGGTCGTGATCGGTTACGCCAGCAACGCCGCCGCGGCGAGCGAGGTGGTGGCGGAGATCGAAGCCGTCGGCGGCA
AGGCGATCGCGGTGAAATGCGACGTCGGCCTCGAGGCCGAAATTCTGGCGATGTTCGCCGCCGCGGACGCCTTCGGCCCG
CTCGGCGCGCTGGTGAACAATGCCGGCATCGTCGGCCCGACCGCGCGCGTGGACGAGATGTCGGCCGAACGCATCCAGCG
CATCATGGCGGTCAACGTCACCGGCAGCATCCTGTGCGCCCGCGAGGCGGTGAAGCGGATGTCGACCCGGCACGGCGGCC
AGGGCGGCGTCATCGTCAATCTGTCGTCGGTCGCGGCCAAACTCGGCTCGCCGAACACCTATGTCGACTATGCGGCCTCC
AAGGGCGCGGTCGATTCCTTCACAGTCGGGCTCGGACACGAGCTCGCCGGCGAAGGCATTCGGGTCGCGGCGATTCGGCC
GGGGCTGATCGACACCGAGATCCATGCGTCCGGGGGTGATCCGGAACGCGCCCATCGGCTGAGCGTCAACGTGCCGATGA
AGCGCGTCGGCCGCGCCGAAGAAATCGCCAACGCCGTCGTCTGGCTGCTGTCCGACGAGGCCTCCTATGTCACCAGCGCC
ATCCTCGACGTGTCGGGGGGACGGTAG

Protein sequence :
MNDRVVIITGGSRGIGRATALACARRGFKVVIGYASNAAAASEVVAEIEAVGGKAIAVKCDVGLEAEILAMFAAADAFGP
LGALVNNAGIVGPTARVDEMSAERIQRIMAVNVTGSILCAREAVKRMSTRHGGQGGVIVNLSSVAAKLGSPNTYVDYAAS
KGAVDSFTVGLGHELAGEGIRVAAIRPGLIDTEIHASGGDPERAHRLSVNVPMKRVGRAEEIANAVVWLLSDEASYVTSA
ILDVSGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 2e-50 55
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 3e-53 54