Gene Information

Name : Rpdx1_4467 (Rpdx1_4467)
Accession : YP_004110751.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Virulence
Product : LuxR family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 4801734 - 4802345 bp
Length : 612 bp
Strand : +
Note : KEGG: bra:BRADO2434 response regulator FixJ; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR

DNA sequence : 
ATGCCTAAGGGAACCGTGCATGTGATCGACGACGACCTGGCGATGCGGGAATCGATCGAATTCCTGCTCGGCTCGGCCGG
CTACGAGGTCAGGCTGTACGAATCCGCACAGGCGTTTCTCGACGAGCCGGAGGTCGAGTTCGGCTGCATCCTGTCCGACG
TGCGGATGCCCGGCATCGACGGTCTCGACCTGCTGAAGCGGCAAAAGGCAGCCGGCAGCAAGCTGCCGGTGCTGATCATG
ACCGGCCACGGCGACGTGCCGCTCGCGGTCGAAGCGATGAAGCTCGGCGCCTCTGACTTCATCGAGAAGCCGTTCGACGA
CGATCGCCTGATCGGACTGATCGAACTGGCGCTGAAGCAGGCGCAGGAAGGCGCCAGGAGCGAAGCGGTTACGCAGGACA
TCGCGCTGCGGATCCAGTCGCTGAGCCCGCGGGAACGCCAGGTGATGGACGGCCTGGTCGCCGGCATGTCGAACAAAGTG
ATCGCCCGCGAGTTCGATATCAGTCCGCGGACCATCGAGGTCTATCGCGCCAACGTGATGACCAAGATGCAGGCCTCGAG
CCTGTCGGAACTGGTCCGGATGGCGATGCGCGGCGGCGTCATCAAGGATTGA

Protein sequence : 
MPKGTVHVIDDDLAMRESIEFLLGSAGYEVRLYESAQAFLDEPEVEFGCILSDVRMPGIDGLDLLKRQKAAGSKLPVLIM
TGHGDVPLAVEAMKLGASDFIEKPFDDDRLIGLIELALKQAQEGARSEAVTQDIALRIQSLSPRERQVMDGLVAGMSNKV
IAREFDISPRTIEVYRANVMTKMQASSLSELVRMAMRGGVIKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 1e-28 41
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-28 41
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-28 41
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-28 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpdx1_4467 YP_004110751.1 LuxR family two component transcriptional regulator VFG0488 Protein 5e-29 41