Gene Information

Name : Rpdx1_4368 (Rpdx1_4368)
Accession : YP_004110653.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Unknown
Product : 3-oxoacid CoA-transferase subunit A
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : 2.8.3.5
Position : 4703355 - 4704071 bp
Length : 717 bp
Strand : -
Note : TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: bbt:BBta_6830 acetyl-CoA/acetoacetyl-CoA transferase, alpha subunit; PFAM: coenzyme A transferase

DNA sequence :
ATGAACAAGGTATACCCCGACGCCAAGACGGCACTCGACGGCATCTTGCGGGACGGCATGATGATCATGTCCGGCGGCTT
TGGCCTGTGCGGCATCCCCGAGACATTGTCCGACGCGATCCGCGACTCCGGCGTCAAGGATCTGACTTTCGTCTCCAACA
ACGCGGGCGTCGACGGCATCGGCCTCAGCCGGTTGCTCGAGACCCGGCAGATCAAGAAAATGATCTCGTCCTATGTGGGC
GAGAACAAGCTGTTCGCGCAGCAGTTCCTGGCGGGCGAACTGGAGCTGGAGTTCGCGCCGCAGGGCACGCTGGCCGAGCG
TATCCGCGCCGGTGGCGCCGGCATCCCGGCGTTCTTCACCAAGACCGGCGTCGGCACCCTGGTGGCGGAAGGCAAGGAAG
TCCGCGAATTCGACGGCGAGAAGTACGTGATGGAACGCGGCCTGTTCGGCGACGTCGCGATCGTCCACGCCTGGAAGGGC
GATACCGCCGGCAATCTCGTGTACCGAAAGACGGCGCGCAACTTCAATCCGATGATGGCCACCGCGGCGAAGATCACCAT
CGCCGAGGTCGAGCATCTGGTTCCGGCGGGCGAGATCGACCCGGATCATATCCACACCCCGGGCATCTTCGTGCAGCGCA
TCGTCCACGTGCCGAACGCCAAGAAGCACATCGAGCAGCGTACCACCCGCAAGCGCGCCGAATCGGCGGCGAGCTGA

Protein sequence :
MNKVYPDAKTALDGILRDGMMIMSGGFGLCGIPETLSDAIRDSGVKDLTFVSNNAGVDGIGLSRLLETRQIKKMISSYVG
ENKLFAQQFLAGELELEFAPQGTLAERIRAGGAGIPAFFTKTGVGTLVAEGKEVREFDGEKYVMERGLFGDVAIVHAWKG
DTAGNLVYRKTARNFNPMMATAAKITIAEVEHLVPAGEIDPDHIHTPGIFVQRIVHVPNAKKHIEQRTTRKRAESAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 3e-36 48