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Name : Rpdx1_4264 (Rpdx1_4264) Accession : YP_004110549.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Virulence Product : ABC-3 protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 4591264 - 4592139 bp Length : 876 bp Strand : - Note : PFAM: ABC-3 protein; KEGG: rhi:NGR_c31040 putative iron transmembrane ABC transporter component DNA sequence : ATGGCCGAGGGTTCGCTGCTCGCCGAACTGCTGGTGCCGTTCGCCTACGGCTACATGCTGAAGGCGATGTGGGTGAGCGC CCTGGTCGGCGGCGTGTGCGCCTTTCTGTCGGCCTATCTGATGCTGAAGGGCTGGTCGCTGATGGGCGACGCCCTCGGGC ACGCGATCGTTCCGGGCGTCGCCGCCGCCTATATCCTCGGCGCGCCCTTCGCGCTCGGCGCGTTCTTCGCCGGCATCCTG GCGGCGGCCGGCATGCAGTTCGTCAAGCTGAAGTCGCGGCTGCGCGAGGACGCGGTGATCGGGCTGGTGTTCACCACGTT GTTCGCGCTCGGTCTGCTGATGGCCTCGATCTGGCCGATGTCGGTGAGCGTGCAGACCATCGTGCTCGGCAACATCCTGG CGATCTCCGATGCCGACGTCGTCCAGGTGGCGATCATCTCCGCAGTGTCGCTGGCGATTCTGGCGCTGAAGTGGAAGGAT CTGATGGTGACGTTCTTCGACGAGAGCCACGCCCGCAGCATCGGGCTCGATCCGCGGCGGCTCAAGATCGTGTTCTTCAC CCTGCTCAGCGCCTGCACGGTCGCCGCGCTGCAGACGGTCGGCGCCTGTCTGGTGATCGCGCTGGTGGTGACGCCCGGCG CCACCGCCTATCTGCTCACCGATCGGTTCGGCCGGTTGATCCTGATCAGCGTCGCGCTCGGCGCCGTCACCAGCTTTGCC GGCGCCTATCTCAGTTATTTTCTCGACGGCGCCACCGGCGGCGTGATCGTCACGCTGCAGACCCTGCTGTTTCTGGCCGC GTTCTACTTCGCGCCGAAGCACGGGGTGATCGCGGCACGCCGGCGGCGGCACGCGACGGCGGGGGTGACGCCGTGA Protein sequence : MAEGSLLAELLVPFAYGYMLKAMWVSALVGGVCAFLSAYLMLKGWSLMGDALGHAIVPGVAAAYILGAPFALGAFFAGIL AAAGMQFVKLKSRLREDAVIGLVFTTLFALGLLMASIWPMSVSVQTIVLGNILAISDADVVQVAIISAVSLAILALKWKD LMVTFFDESHARSIGLDPRRLKIVFFTLLSACTVAALQTVGACLVIALVVTPGATAYLLTDRFGRLILISVALGAVTSFA GAYLSYFLDGATGGVIVTLQTLLFLAAFYFAPKHGVIAARRRRHATAGVTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 3e-74 | 70 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-74 | 70 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-74 | 70 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 2e-74 | 70 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-74 | 70 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 2e-39 | 42 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-39 | 42 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-39 | 42 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-39 | 42 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 2e-39 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpdx1_4264 | YP_004110549.1 | ABC-3 protein | BAC0441 | Protein | 8e-75 | 70 |
| Rpdx1_4264 | YP_004110549.1 | ABC-3 protein | BAC0351 | Protein | 1e-74 | 70 |
| Rpdx1_4264 | YP_004110549.1 | ABC-3 protein | BAC0352 | Protein | 1e-39 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpdx1_4264 | YP_004110549.1 | ABC-3 protein | VFG0527 | Protein | 1e-74 | 70 |
| Rpdx1_4264 | YP_004110549.1 | ABC-3 protein | VFG0528 | Protein | 9e-40 | 42 |
