Name : Rpdx1_4263 (Rpdx1_4263) Accession : YP_004110548.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Virulence Product : ABC-3 protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 4590395 - 4591267 bp Length : 873 bp Strand : - Note : PFAM: ABC-3 protein; KEGG: spe:Spro_2130 ABC-3 protein DNA sequence : GTGAGCGAGGTCGCCGACTGGATCACCGGACCGCTGGCCTACCCGTTCATGCAGCGGGCGCTGGTCGCGTCTGTGATGGT GGCAGCGGTCTGCGCGGTGCTGTCCTGCTATCTGGTGCTGAAGGGCTGGTCGCTGATGGGCGACGCCGTCTCTCACGCGG TGCTGCCCGGCATCGTGGTCGCCCATGTGCTGAACCTGCCGCTGGCGGCCGGGGCGTTCGTGGCCGGCCTGTCGTGCGCG GTGGTCACCGGCTATCTGAAGGAGAACAGCCGGGTGAAGGAGGACACGGTGATGGGCATCGTGTTCTCCGGGATGTTCGG CTTCGGCCTGGTGCTGTTCACCAGGATCGAGACCGACCAGCATCTCAACCACATCCTGTTCGGCAATGTGCTCGGCGTCA CGCCGCGCGACCTGATCGAGATCGCGATCGTCGCCGGTGGGACGCTGCTGGCGGTGCTGCTCAAACGCCGCGACCTCTTG CTGTACTGCTTCGACCCCCACCACGCCCGCTCGATCGGCCTGCCGGTGAGGGCGCTGCACTACGGACTGCTGGTGCTGCT CGCGTTGACGATCGTCGCGTCGCTGAAGGCGGTCGGCATCATCCTGGTGGTCGCGATGCTGATCGCACCCGGCGCCACCG CCTATCTGCTCACCGACAGCTTCGAGCGGATGCTGCTGGTCGCCGCTGCGGTCGCCACCGGCTCGGCCGCGGTCGGCACG CTCGTCAGCTTCCACATCGACGGCGCCACGGGCGCCTGCATCGTGCTGACGCAGGCGCTGGTGTTCTGCGCGGCGTTCCT GTTCGCACCGAAGCGCGGATTGCTGCGTGCCAACCGGGCCGAGGGAGCAAGCCGGTCTGGGCCGGCGGGGTGA Protein sequence : MSEVADWITGPLAYPFMQRALVASVMVAAVCAVLSCYLVLKGWSLMGDAVSHAVLPGIVVAHVLNLPLAAGAFVAGLSCA VVTGYLKENSRVKEDTVMGIVFSGMFGFGLVLFTRIETDQHLNHILFGNVLGVTPRDLIEIAIVAGGTLLAVLLKRRDLL LYCFDPHHARSIGLPVRALHYGLLVLLALTIVASLKAVGIILVVAMLIAPGATAYLLTDSFERMLLVAAAVATGSAAVGT LVSFHIDGATGACIVLTQALVFCAAFLFAPKRGLLRANRAEGASRSGPAG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 6e-46 | 55 |
sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 1e-45 | 55 |
sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 1e-45 | 55 |
sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 1e-45 | 55 |
sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 7e-46 | 55 |
sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 3e-36 | 44 |
sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-36 | 44 |
sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-36 | 44 |
sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 2e-36 | 44 |
sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-36 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Rpdx1_4263 | YP_004110548.1 | ABC-3 protein | BAC0442 | Protein | 4e-61 | 64 |
Rpdx1_4263 | YP_004110548.1 | ABC-3 protein | BAC0352 | Protein | 3e-46 | 55 |
Rpdx1_4263 | YP_004110548.1 | ABC-3 protein | BAC0441 | Protein | 9e-35 | 45 |
Rpdx1_4263 | YP_004110548.1 | ABC-3 protein | BAC0351 | Protein | 1e-36 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Rpdx1_4263 | YP_004110548.1 | ABC-3 protein | VFG0528 | Protein | 3e-46 | 55 |
Rpdx1_4263 | YP_004110548.1 | ABC-3 protein | VFG0527 | Protein | 1e-36 | 44 |