Gene Information

Name : Rpdx1_4060 (Rpdx1_4060)
Accession : YP_004110349.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein P47K
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 4356971 - 4358179 bp
Length : 1209 bp
Strand : +
Note : PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rlt:Rleg2_2385 cobalamin synthesis protein P47K

DNA sequence :
ATGGATAACTCCCTGCTTCCGGTGACCGTCCTGTCCGGCTTCCTCGGTGCCGGGAAGACCACGCTGCTCAACCGGATGCT
CGCCAACCGCGAAGGTCGGCGGATCGCGGTGATCGTCAACGACATGAGCGAGGTAAACATCGACGCCGAACTGGTGCGCC
AGGACGGCGGGATGACACGCACCGAGGAATCGCTGGTCGAGATGACCAACGGCTGCATCTGCTGCACCTTGCGCGAAGAT
CTGCTGGTCGAGGTCCGCAAGCTCGCCGAAAGCGGCCGGTTCGACGCGCTGGTGATCGAATCCACCGGGATTGCCGAGCC
GCTGCCGGTCGCGGCGACCTTCGAATTCCGCGACGAGAACGGCGACAGTCTGTCGGACATCGCCCGGCTCGACACCATGG
TGACGGTGGTCGACACCGCCAGCCTGCTGGCGAACTATTCCAGCCAGGAATTCCTGCGCGATCGCGGCGAAGTCGCCGGC
GACGACGACGAGCGGACACTGGTCGATCTGCTGGTCGAGCAGATCGAATTCGCCGACGTGATCGTTCTCAACAAGGCATC
GGCGGCTTCCCCCGCGCGGCGCGAAACCGCGCGATCGATCGTGCGCGCGCTGAACTCGGACGCCAAGATCATCGAGGCGG
ATTTCGGCGAAGTGCCGCTGTCGTCGGTGCTGCACACCGGGCTGTTCGATTTCGAGCGCGCGCACCAGCACCCGCTGTGG
TTCAAGGAGCTGAACGGCTTTTCAGATCACGTGCCGGAGACCGAGGAATACGGCATCCGCTCGTTCGTCTATCGCGCGCG
GCGGCCGTTTCATCCGCTGCGCTTCCAGTCGTTCTGCAACCGGAGCTGGCCGGGCGTGATCCGCGCCAAGGGCTTCTTCT
GGCTGGCGACGCGACCGCAGCATGTCGGCGAGCTGGCGCAGGCCGGCGCGATGGTCCGGACCTCCAAGCGCGGGCTGTGG
TGGTCGGCGGTGCCCACGCAGCATTGGCCGGACAATGTCGACTGGCACGAGGCGATGAAGCCGTATTTCGACCCGGTGTG
GGGCGACCGCCGCCAGGAGATCGTGTTCATCAGCACCGGCGAGATGGACGAAACCGCGTTGCGCCGCCAGCTCGACATGT
GCCTGGTGGGCGAGGACGCAGAGTTCAAGCCCGATGCGTGGCGGCAGCTCCCCGATCCGTTCCCGAGCTGGACGCCGGCA
CAGAACTGA

Protein sequence :
MDNSLLPVTVLSGFLGAGKTTLLNRMLANREGRRIAVIVNDMSEVNIDAELVRQDGGMTRTEESLVEMTNGCICCTLRED
LLVEVRKLAESGRFDALVIESTGIAEPLPVAATFEFRDENGDSLSDIARLDTMVTVVDTASLLANYSSQEFLRDRGEVAG
DDDERTLVDLLVEQIEFADVIVLNKASAASPARRETARSIVRALNSDAKIIEADFGEVPLSSVLHTGLFDFERAHQHPLW
FKELNGFSDHVPETEEYGIRSFVYRARRPFHPLRFQSFCNRSWPGVIRAKGFFWLATRPQHVGELAQAGAMVRTSKRGLW
WSAVPTQHWPDNVDWHEAMKPYFDPVWGDRRQEIVFISTGEMDETALRRQLDMCLVGEDAEFKPDAWRQLPDPFPSWTPA
QN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 5e-81 48
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 1e-81 48