|
Name : Rpdx1_3575 (Rpdx1_3575) Accession : YP_004109877.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : cobalamin synthesis protein P47K Function : - COG functional category : R : General function prediction only COG ID : COG0523 EC number : - Position : 3831993 - 3833231 bp Length : 1239 bp Strand : + Note : PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rsh:Rsph17029_3566 cobalamin synthesis protein, P47K DNA sequence : GTGTCCAAGCCGCAAACGTCTGACGATCGCCTGCCGGTCACGGTGCTGTCGGGATTCCTCGGGTCCGGCAAGACCACGCT GCTCAATCACGTGCTCAACAACCGCGACGGCCGGCGGGTCGCGGTGATCGTCAACGACATGAGCGAGGTCAACATCGACG CCGATCTGGTGCGCGAGGAGACCACGCTCAGCCGCTCCGAGGAAAAGCTGGTGGAGCTCACCAATGGCTGCATCTGCTGC ACGCTGCGCGAGGATCTGCTGAACGAGGTCCGCCGCCTCGCCGACGAACGCCGGTTCGACTACCTGCTGATCGAGAGCAC CGGGGTGTCGGAGCCGCTGCCGGTCGCCGCGACCTTCGAGTTTCGCCAGGAGGACGGCGACAGCCTGTCCGACATCGCAC GGCTCGACGCCATGGTGACGGTGGTCGACACCGTCCACCTGCTGAAGGACTATTCGTCGACCGACTTTCTCGCCGACCGC GGCGAGACCGCGGGCGAAGGCGACGAGCGCACCCTGGTCAATCTGCTGGTCGAGCAGATCGAGTTCGCCGACATCGTCGT CATGAACAAGGTATCGGACGCCACACCCGCGCAGCGCGAGGCGGCGCGGGCCATCATCCACGCGCTCAATCCCGACGCCC GGCTGATCGAGACCGACTACAGCCGCGTGTCACCGGACCAGATCTTCGACACCGGCCTGTTCGACTTCGAACGCGCCCAT CAGCACCCGATGTGGTTCAAGGAGCTGTACGGCTTCGCCGACCATGTCCCGGAGGACGCCGAATACGGCGTCACCAGCTT CGTCTGGGAGGCGCGCCGGCCGCTGATCCCGGAGCGCTTCAACGAATTCCTGCAGACGCCGCTGCCCGGCGTCATCCGCG CCAAGGGGCATTTCTGGCTGGCGACGCGGCCCGACTGGGTCGGCGAATTCAGCCTCGCCGGCGCTCTGGCCACCACCAAG CCGCTCGGCTTCTGGTGGGCCGCAGTGCCGCCGTCGCGCTGGCCGTCCGACCCGGCAGTGCAGGCGCAGGTCAAGGCCAA ATTCGACCCGGTGTACGGCGACCGGCGCCAGCAGATCGTGTTCATCGGCATGCTCGGGACGATGAGCCGCGCCCGCATCA CCACCATGCTGGAGCGCTGCCTGGCCGAGCCGCCGAGCGCCGAGGCTTTCGATCCGAACAGCTACCGTCACCTGCCCGAC CCGTTTCCGGGATGGCGGCGCGTCACCGACGCGGCCTGA Protein sequence : MSKPQTSDDRLPVTVLSGFLGSGKTTLLNHVLNNRDGRRVAVIVNDMSEVNIDADLVREETTLSRSEEKLVELTNGCICC TLREDLLNEVRRLADERRFDYLLIESTGVSEPLPVAATFEFRQEDGDSLSDIARLDAMVTVVDTVHLLKDYSSTDFLADR GETAGEGDERTLVNLLVEQIEFADIVVMNKVSDATPAQREAARAIIHALNPDARLIETDYSRVSPDQIFDTGLFDFERAH QHPMWFKELYGFADHVPEDAEYGVTSFVWEARRPLIPERFNEFLQTPLPGVIRAKGHFWLATRPDWVGEFSLAGALATTK PLGFWWAAVPPSRWPSDPAVQAQVKAKFDPVYGDRRQQIVFIGMLGTMSRARITTMLERCLAEPPSAEAFDPNSYRHLPD PFPGWRRVTDAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0450 | YP_039898.1 | cobalamin synthesis protein | Not tested | vSa¥á | Protein | 7e-78 | 45 |
| SAS0408 | YP_042534.1 | cobalamin synthesis protein | Not tested | vSa¥á | Protein | 8e-78 | 45 |
