Gene Information

Name : Rpdx1_3413 (Rpdx1_3413)
Accession : YP_004109716.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 3647155 - 3648045 bp
Length : 891 bp
Strand : -
Note : KEGG: bja:bll5732 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGACGAACGACAAGTTCATTTCCGTCGAAGCGATCGCCAAGCGCTATCCGGCCGCTGGCGGCGGGCAGACCACGATCTT
CGAGAACCTGTGGCTGTCGCTGCCGCGCGGTGAATTCGGCTGCGTGATCGGCCACTCCGGCTGCGGCAAGACCACCGTGC
TGAATATTCTCGCCGGGCTCGACCAGCCGACCGAGGGTGCGGTGATCGTCGACGGCCAGGCGATCGAAGGCACCAGCCTC
GACCGCGCGGTGATCTTCCAGAGCCACGCGCTGCTGCCGTGGCGTACGGTGATGGGCAACGTCGCCTATGCGGTGTCGTC
GAAATGGCGTGACTGGGACAAGGCCAAGGTCCGTGCCCACGCCCAGCGCTTCATCGATCTGGTCGGCCTGACCGGTTCGG
AGAACAAGCGCCCGTCGGAATTGTCGGGCGGCATGAAGCAGCGGGTCGGCATCGCGAGGGCGCTGTCGATCACGCCGAAG
ATCATGCTGATGGACGAGCCGTTCTCGGCGCTCGATGCGCTGACCCGCGGCTCGCTGCAGGACGAGGTCCGCCGCATCTG
TCTGGAGACCGGGCAGACCACCTTCATGATCACCCACGACGTCGACGAGGCGATGTATCTGGCCGACAAGATCTACCTGA
TGACCAACGGCCCCGGCGCGGTGATCGCCGAGATCGTCGAGAACCCGCTGCCGAAGGACCGCGCCAGAATCGATCTGCAC
CGGCATCCTTACTACTACGGTCTGCGCAACCACATCGTCGACTTCCTGGTGACGCGCAGCAAGACCTTCACCAGCACCAA
TCCGCATCACGATCCGCTGCAGGTGCCGGTCGTCCGGCCCGGCGTTGATGACGCCGCGACGCCCGTGCCGCTGCAGGCCA
ACGCCCGCTGA

Protein sequence :
MTNDKFISVEAIAKRYPAAGGGQTTIFENLWLSLPRGEFGCVIGHSGCGKTTVLNILAGLDQPTEGAVIVDGQAIEGTSL
DRAVIFQSHALLPWRTVMGNVAYAVSSKWRDWDKAKVRAHAQRFIDLVGLTGSENKRPSELSGGMKQRVGIARALSITPK
IMLMDEPFSALDALTRGSLQDEVRRICLETGQTTFMITHDVDEAMYLADKIYLMTNGPGAVIAEIVENPLPKDRARIDLH
RHPYYYGLRNHIVDFLVTRSKTFTSTNPHHDPLQVPVVRPGVDDAATPVPLQANAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-25 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-27 41