Gene Information

Name : Rpdx1_3373 (Rpdx1_3373)
Accession : YP_004109677.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3603989 - 3605419 bp
Length : 1431 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase; KEGG: bbt:BBta_2831 aldehyde dehydrogenase

DNA sequence :
ATGGTCAACCGCATGCAGTTCTACATCGATGGCGCCTGGGTCGATCCCGTCGTCAAGAAGTCGACGCCGGTCGTCAATCC
CGCCACCGAGGAGGCGATGTATGAGGTTGCGCTCGGCTCCAAGGCCGATGTCGACAAGGCGGTCGCCGCGGCCAAGCGCG
CGTTCGAGATGTTCTCGGTGACCAGCCGCGAAGAGCGTATCGCGCTGCTCGAAAAGATCATCGCGGTCTACAAGAGCCGG
ATGAAGGAGATCGGCGCGGCGATTTCCGACGAGATGGGCGCCCCGCTGCCGATGGCCGAAAAGATGCAGGCCGGCGCCGG
CCTCGGTCACATCATGTCGACCCTCGACGTCTTGAAGAACTATCAGTTCGAGGAGCCGATGGGCTCGGCGATGATCGTGC
GCGAGCCGATCGGCGTCATCGGCATGATCACGCCGTGGAACTGGCCGCTCAACCAGATCGCCTGCAAGGTCGCCCCGGCG
ATCGCGGCGGGGTGCACCATGATCCTGAAGCCGTCGGAATTCACCCCGACTTCGGCGCTGATCTTCGCCGAAATCCTGCA
CGAAGCCGGCGTGCCGAAGGGCGTGTTCAACCTCGTCAACGGCCTCGGCCCGGAGGTCGGCGCGGCGATGAGCGAGCACC
CGGACATCGACATGATCTCGTTCACCGGCTCGACCCGCGCCGGCATCGACGTCGCCCAGCGCGCGGCGCCGACGGTGAAG
CGCGTCAGCCAGGAACTCGGCGGCAAGTCGCCCAACGTGATCCTCGAGGACGCCGACCTGACCAAGGCGGTGACCGGCGG
GGTGATGCACATGTTCAACAACTCCGGCCAGTCGTGCAACGCGCCGAGCCGGATGATCGTGCCGCTGTCGAAGATGAAGG
AGGTCGCCGCGATCGCCAAGGGCGTCGCCGAGAAGACCAAGGCCGGCGATCCCCGCGCCGAGGGCACCACCATCGGTCCG
GTCGTCAACCGCATTCAGTGGGACAAGATCCAGACGCTGATCAACAAGGGCATCGAGGAGGGCGCCACCCTCGTCGCCGG
CGGTCCCGGCCTGCCGGAAGGCGTCAACAAGGGCTTCTATGTGCGCCCGACGGTGTTCGCCGACGTCACCAAGGACATGA
CCATCGCGCGCGAAGAAATCTTCGGTCCGGTGCTGGTGATCATGGGCGCCAAGGACGAGAACGAGGCGGTCGAGCTCGCC
AACGACACGCCGTACGGTCTGGCCGGCTACGTCTCGGCCGGCTCGGTCGATCGCGCCCGTGCGGTCGGCCGCAAGATCCG
CGCCGGCAACGTCAACCTGCAAGGCGTGCCCAACGAACGCACCGCGCCGTTCGGCGGCTACAAGCAGTCGGGCAACGGCC
GCGAGTGGGGCAAGTTTGGTCTCGAAGAATATCTCGAGGTCAAGGCGATCGCCGGCTTCAACGCCGCGTAA

Protein sequence :
MVNRMQFYIDGAWVDPVVKKSTPVVNPATEEAMYEVALGSKADVDKAVAAAKRAFEMFSVTSREERIALLEKIIAVYKSR
MKEIGAAISDEMGAPLPMAEKMQAGAGLGHIMSTLDVLKNYQFEEPMGSAMIVREPIGVIGMITPWNWPLNQIACKVAPA
IAAGCTMILKPSEFTPTSALIFAEILHEAGVPKGVFNLVNGLGPEVGAAMSEHPDIDMISFTGSTRAGIDVAQRAAPTVK
RVSQELGGKSPNVILEDADLTKAVTGGVMHMFNNSGQSCNAPSRMIVPLSKMKEVAAIAKGVAEKTKAGDPRAEGTTIGP
VVNRIQWDKIQTLINKGIEEGATLVAGGPGLPEGVNKGFYVRPTVFADVTKDMTIAREEIFGPVLVIMGAKDENEAVELA
NDTPYGLAGYVSAGSVDRARAVGRKIRAGNVNLQGVPNERTAPFGGYKQSGNGREWGKFGLEEYLEVKAIAGFNAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-48 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpdx1_3373 YP_004109677.1 aldehyde dehydrogenase VFG0082 Protein 2e-48 42