|
Name : Rpdx1_0320 (Rpdx1_0320) Accession : YP_004106695.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : heat shock protein HslVU, ATPase subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 352211 - 353512 bp Length : 1302 bp Strand : + Note : TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: nwi:Nwi_0129 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase DNA sequence : ATGACCGACTTCTCCCCCCGCGAAATCGTTTCCGAACTCGACCGCTTCATCGTCGGACAGGCCGACGCCAAGCGCGCGGT CGCCATCGCGCTGCGCAACCGCTGGCGGCGGCTGCAGCTCGAAGGGGCTTTGCGCGAAGAAGTGCTGCCGAAGAACATCC TGATGATCGGGCCGACCGGCGTCGGCAAGACCGAGATCGCCCGGCGGCTGGCCAAGCTCGCCGGCGCGCCGTTCCTCAAG GTCGAGGCGACCAAGTTCACCGAAGTCGGCTATGTCGGCCGCGACGTCGAGCAGATCATCCGCGACCTGGTCGAAGTCGC CATCGCCCAGGTCCGCGAGAAGAAGCGCAAGGACGTCCAGGCGCGCGCCCAGATCGCCGCCGAAGAGCGCGTGCTCGACG CGCTGGTCGGACCCGGCTCGGGCCCGGCGACGCGCGATTCGTTCCGCAAGAAGCTGCGTTCGGGCGAACTCAACGACAAG GAGATCGAGATCGAGACCCAGGCCGGAGCCGGCTCGCCGATGCTGGAAATTCCCGGGATGCCGGGCGCCCAGATCGGCGC GATCTCTCTCGGCGACATCTTCGGCAAGATGGGCGGGCGTACCAAGACCCGGCGGCTCACCGTCGCCGATTCGCACGAAA TTCTGGTCAACGAGGAAGCCGACAAGCTGCTCGACAACGATCAGCTCGTGCAGGAAGCGATCACGGCAGTCGAGAACAAC GGCATCGTCTTCCTGGACGAGATCGACAAGATCTGCGTCCGCGACGGCCGCAGCGGCGGCGAGGTCTCGCGCGAGGGCGT GCAGCGCGATCTGCTGCCGCTGATCGAAGGCACCACGGTGTCGACCAAGCATGGCGCGGTGAAGACCGAGCACATCCTGT TCGTCGCCTCGGGCGCCTTCCACATCGCCAAGCCGTCCGATCTGCTTCCTGAATTGCAGGGCCGGTTGCCGATCCGCGTC GAACTCAATGCGCTCAGCCGCGACGACATGCGGCGCATCCTCACCGAGCCGGAGGCGTCGCTGATCAAGCAATATGTAGC GCTGATGAAGACCGAAGGCGTGACGCTGGAGTTCACCGACGACGCCATCGACGCGCTCGCCGATGTCGCAGTGGCGGTGA ATTCGACCGTCGAGAACATCGGCGCGCGGCGACTGCAGACCGTGATGGAGCGCGTGCTCGACGAGATCTCGTTCGTCGCC CCCGACCGCCACGGCGAGACCTTCCGGGTCGATGCGGACTACGTGAAGACCAATGTCGGCGATCTGGCCAAGAACACGGA TTTGAGCCGGTTTATTTTGTGA Protein sequence : MTDFSPREIVSELDRFIVGQADAKRAVAIALRNRWRRLQLEGALREEVLPKNILMIGPTGVGKTEIARRLAKLAGAPFLK VEATKFTEVGYVGRDVEQIIRDLVEVAIAQVREKKRKDVQARAQIAAEERVLDALVGPGSGPATRDSFRKKLRSGELNDK EIEIETQAGAGSPMLEIPGMPGAQIGAISLGDIFGKMGGRTKTRRLTVADSHEILVNEEADKLLDNDQLVQEAITAVENN GIVFLDEIDKICVRDGRSGGEVSREGVQRDLLPLIEGTTVSTKHGAVKTEHILFVASGAFHIAKPSDLLPELQGRLPIRV ELNALSRDDMRRILTEPEASLIKQYVALMKTEGVTLEFTDDAIDALADVAVAVNSTVENIGARRLQTVMERVLDEISFVA PDRHGETFRVDADYVKTNVGDLAKNTDLSRFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-90 | 46 |
