|
Name : Rpdx1_0298 (Rpdx1_0298) Accession : YP_004106673.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 333033 - 333746 bp Length : 714 bp Strand : + Note : TIGRFAM: ribonuclease PH; KEGG: nha:Nham_0151 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 DNA sequence : ATGCGGCCGAGCCGCCGTGCGCCCGACGAATTGCGCGCCGTGTCGCTGGAACGCGGCGTGGTCAAATACGCCGAGGGCTC CTGCCTGGTGAAGTTCGGCGACACCCATGTGCTGGTGACCGCCACCCTGGAAGAACGGCTGCCGCCGTGGCTGAAGGGCC AGGGCCGCGGCTGGGTGACGGCCGAATACGGCATGCTGCCGCGTGCCACGCTGGAACGCACCCGGCGCGAGGCTTCGGCC GGCAAGCAGAATGGCCGCACCGTGGAGATTCAGCGCCTGATCGGCCGCTCGCTGCGCACCATCGTCGATCTCGAGGCGCT CGGAGAGCGCCAGATTACGGTCGATTGCGACGTGCTGCAGGCCGATGGCGGCACCCGCACCGCCTCGATCACCGGCGCCT GGGTCGCGCTCGCCGACTGCCTGAACTGGATGAAGGCTCGCAACATGATCAAGACCCAGGTGCTCCGCGACAATGTCGCG GCGATCTCCTGCGGCATCTACAACGGCACCCCGGTGCTGGATCTCGACTATGCCGAGGACTCCGAGGCCGAGACCGACGC CAATTTCGTGATGACCGGCGACGGCCGCCTGGTCGAGGTGCAGGGCACCGCAGAACGCACCCCGTTCTCGCAGGACGAGT TCCTGCAGCTGATGGCGCTCGCCCAGAAGGGTGTCGCCCGGCTGGTGGACCTGCAGAAAATGGCGGTTGGGTGA Protein sequence : MRPSRRAPDELRAVSLERGVVKYAEGSCLVKFGDTHVLVTATLEERLPPWLKGQGRGWVTAEYGMLPRATLERTRREASA GKQNGRTVEIQRLIGRSLRTIVDLEALGERQITVDCDVLQADGGTRTASITGAWVALADCLNWMKARNMIKTQVLRDNVA AISCGIYNGTPVLDLDYAEDSEAETDANFVMTGDGRLVEVQGTAERTPFSQDEFLQLMALAQKGVARLVDLQKMAVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 2e-50 | 50 |
