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Name : Rpdx1_2845 (Rpdx1_2845) Accession : YP_004109161.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Resistance Product : DEAD/DEAH box helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 3033279 - 3035381 bp Length : 2103 bp Strand : + Note : KEGG: nha:Nham_2055 DEAD/DEAH box helicase-like; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein DNA sequence : ATGCGCCCTGCTCTGCTCAATCCGCTGTTCGCCCCGGTCACCAGTCTTTCCGGCGTCGGACCGAAACAGGACAAGCTGTT CCGCTATCTGCTGGACCGCGACGACACCCCGCGGCTGGCCGATCTGCTGCTGCATCTGCCGACCAGCGTGATCGACCGGC GCGCCAGGCCGAAGATTCGCGACGCGGTGCCGGGCACGGTGGTGACGCTTGAGGTCACGGTCGACCGCCACCGCGCGCCG CCGCCGGGCCGCTCGCGCGCGCCGTATCTGGTCTATGCCAGCGACGACACCGGCGACGTGGTGCTGACGTTCTTCCGCGC CAAGCCGGACTATGTGCAGAAGCTGCTGCCGGTCGGCGCCAAGCGCTACGTCTCGGGCACCGGCCAGCTCTACGACGGCA CGCTGCAGATCGTGCATCCGGACCGCGTCGTCGACGAGGAAGCCTTCGCCAAGCTGCCGCAGATCGATCCGGTGTATCCG CTGACCGAGGGACTGGCGATCGGCTCGCTGCGCCGCGCGGTGGCGCAGGCGCTGACCAAGCTGCCGGCGCTGCCGGAATG GATCAGCCCCGAGGTGCTGCGGCGCTGCCGGTTTCCCTCGTTCGCCGAAGCGCTGAAGCACGTCCACATCCCTGATCAGC CGACCGACATTCTGCCGGACGGGCCGTATTGGTCGCGCCTGGCCTATGACGAACTGCTCGCCGGGCAACTCGCGCTGGCT TTGGTGCGGGCGCAGCTCCGCCGCCCGGCCGGCAGCCGCAACGCCGGCGACGGTCGGCTGCGTCACAAGATCATCGACGC GTTGCCTTATGCACTCACCGCCTCGCAGCAGCAGGCCGCGGCGGCGATCGCCGAGGATCTGCGCCAACCGGTGCGGATGC TGCGGCTGCTGCAGGGCGACGTCGGAAGCGGAAAGACCGTGGTGGCGCTGCTGGCCGCAGCGGCGGTCGCCGAGGCCGGC AAGCAGGCGGCACTGATGGCGCCGACCGAAATCCTCGCCCGTCAGCACATCAAAACCATCGCGCCGCTCGCCGAACGCGC CGGGATGCAGGTCGCGATCCTGACCGGCCGCGAGAAAGGCAAGGAACGCCGCGAGATCCTGGAGCGGCTCGCCGCCGGCG AGATCGATTTTCTGGTCGGCACCCACGCCCTGATCCAGGACGACGTGATCTACAAATCGCTGGCGCTGGCCGTGGTCGAC GAACAGCATCGCTTCGGCGTGCGCGAGCGGCTGGCGCTGACCAGCAAGGGCGCCGACGTCGACGTGCTGGTGCTCAGCGC AACGCCGATCCCGCGCACGCTGGTGCTGACCTATTTCGGCGACATGGACGTTTCGGAACTCCGCGAAAAGCCCGCCGGCC GCCAGCCGATCGACACCCGCACGCTGTCCGACACCCGGCTGCCCGAAGTCATCGACGGCATCGGCCGCGCCATCGCCGCC GGCAAACGCGTGTACTGGATCTGCCCGCTGGTGGAAGAATCCGAGAACGTCAAACTCACCGACGCCGAACAACGCTACGA GTCGCTGCGGCAGCGCTTCGGTGATCATCAGGTCGGCCTGGTGCACGGCCGGATGCGCGGCAGCGACAAGGACCACGTCA TGGGCCAGTTCGCGCGCGGCGAGATCAGCGTCTTGGTCGCCACCACGGTGGTCGAGGTCGGTGTCGACGTGCCCGAAGCC ACCATCATGGTGATCGAAAACGCCGAACGGTTCGGCCTGGCGCAACTGCATCAGCTCCGCGGCCGGGTCGGCCGCGGAGC TGATGCGTCGACGTGCCTGCTGCTGTATCGCGAGCCGCTGGGTGAGCTTTCGGGGGCACGGCTGCGGGTGATCCGCGACA CCACCGACGGTTTCCGGATCGCCGAAGAAGACCTCAAGCTGCGCGGCGAAGGCGACGTGCTCGGCACACGGCAGAGCGGC CTGCCCGGCTACCGGATCGCCCGCTCCGAAGTCCATGCCCAGCTTATCACCCAGGCACGCGACGAAGCGCTGCGGATTTT GAAAGACAATCCCAAGCTCGAAGGCCCGTCCGGCGAGGCGCTACGCTGCCTGCTGTATCTCTACGAACGCGACGAAGCGA TCCCGCTGCTGGGAGCTGGTTAG Protein sequence : MRPALLNPLFAPVTSLSGVGPKQDKLFRYLLDRDDTPRLADLLLHLPTSVIDRRARPKIRDAVPGTVVTLEVTVDRHRAP PPGRSRAPYLVYASDDTGDVVLTFFRAKPDYVQKLLPVGAKRYVSGTGQLYDGTLQIVHPDRVVDEEAFAKLPQIDPVYP LTEGLAIGSLRRAVAQALTKLPALPEWISPEVLRRCRFPSFAEALKHVHIPDQPTDILPDGPYWSRLAYDELLAGQLALA LVRAQLRRPAGSRNAGDGRLRHKIIDALPYALTASQQQAAAAIAEDLRQPVRMLRLLQGDVGSGKTVVALLAAAAVAEAG KQAALMAPTEILARQHIKTIAPLAERAGMQVAILTGREKGKERREILERLAAGEIDFLVGTHALIQDDVIYKSLALAVVD EQHRFGVRERLALTSKGADVDVLVLSATPIPRTLVLTYFGDMDVSELREKPAGRQPIDTRTLSDTRLPEVIDGIGRAIAA GKRVYWICPLVEESENVKLTDAEQRYESLRQRFGDHQVGLVHGRMRGSDKDHVMGQFARGEISVLVATTVVEVGVDVPEA TIMVIENAERFGLAQLHQLRGRVGRGADASTCLLLYREPLGELSGARLRVIRDTTDGFRIAEEDLKLRGEGDVLGTRQSG LPGYRIARSEVHAQLITQARDEALRILKDNPKLEGPSGEALRCLLYLYERDEAIPLLGAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-145 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpdx1_2845 | YP_004109161.1 | DEAD/DEAH box helicase | BAC0356 | Protein | 1e-94 | 44 |
