Gene Information

Name : Rpdx1_2722 (Rpdx1_2722)
Accession : YP_004109040.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Unknown
Product : AMP-dependent synthetase and ligase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG0318
EC number : -
Position : 2912918 - 2914567 bp
Length : 1650 bp
Strand : +
Note : PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_4096 acyl-CoA synthetase

DNA sequence :
ATGAGCACCCCGCAAGGTCATTACAGCATCGGTCTGGACAAGACCCCGGCCAATTTCGTGCCGTTGTCGCCGCTGAGCTT
CCTGGAGCGCACCGCCAACGTCTACCCGGAGCTGACCTCCGTGGTGTACGAAGGCCGCCACTATACCTGGAAAGAGACCC
GCGCGCGCTGCCGCCGTTTCGCCTCCTGGCTGGTCCGCAGCGGCATCGGCCGCGGCGACACCGTCGCGGTGATGCTGCCC
AACGTGCCGGCGATGGTCGAAGTGCACTTCGCGGTGCCGATGGCCGGCGCGGTGCTGAATGCGCTGAATATCCGGCTCGA
TTCCGCCGCGATCGCGTTCCAGCTCGACCATGGCGGCGCCAAGATCATCCTGGTCGATCCGGAATTCGCTGGCGTCGTCG
CCGAGGCGCTAACGTTGATGACCAAGCCGAAGCCGCTGGTGATCGACGTCGACGACAAGATGTATCCCGGCAGCCACCGC
ATCGGCGAACTCGAATACGAATACGCCGTCGCGTCCGGCGATCCGACATTTGCGGGCCACCGTCCCGAAGACGAGTGGGA
TGCGATCTCGCTCGGCTATACCTCCGGCACCACCGGCAATCCCAAGGGCGTGGTGACGCATCACCGCGGCGCGTATCTCA
ACGCCGTCAGCAACATCCTGGCCGGCAATCTCGGCCAGCATCCGGTGTATCTGTGGACGCTGCCGATGTTCCACTGCAAC
GGCTGGTGCTTCCCGTGGACCCTCGCGGCCGCGGCCGGCATCAACGTCTGCCTGCGCAAGGTGGATCCGGCCAAGATCTT
CGAGCTGATCCCGAAGCACGGCGTCACCCACATGTGCGGCGCGCCGATCGTCTACAACGCGCTGATCAACGCACCGGAAG
CGCTGAAGGGCGCTGCGGCCAAGCCCGTGGTCGGCCTGATCGCCGGCGCCGCGCCGCCGATGGCGGTGCTGGCCGGCGCC
GAGACTATCGGCATCAAGCTGACGCATGTTTACGGCCTGACCGAAGTGTACGGTCCTGCCTCGGTGTGCGCCGAGCAGCC
GGGTTGGGACGATCTGCCGGTCGCCGAGCGTGCCAAGCTGAAGCGACGCCAGGGCGTGCCCTACCCGATGCAGGAAGCCG
TCACCGTGCTTGATCCCGAGACGATGCAGGAAGTCCCGCGCGACGGCGAGACCATCGGCGAGGTCATGTTCCGCGGCAAC
ATCGTGATGAAGGGCTATCTCAAGAACGAGAAGGCCACCAAGGAAGCGCTCGCCGGCGGCTGGTTTCACACCGGCGATCT
CGGCGTGCTCGACGCCGACGGCTACGTCATCATCAAGGACCGCTCCAAGGACATTATCATCTCGGGCGGCGAGAACGTGT
CGTCGGTCGAGGTCGAGGACGTGCTGTACAAGCACCCGGCGATCCTGTTCGCCGCCGTGGTTGCCAAGCCCGATCCGAAA
TGGGGCGAAGTCCCCTGCGCTTTCGTCGAGCTGAAGGACGGTTCCAGCGCCACCGAAGCCGAGATCATCGCCTATTGCCG
CGAACACCTCCCCGGCTTCAAGACCCCGAAGAGCATCGTGTTCTCGTCGATTCCGAAAACCTCGACCGGTAAGATCCAGA
AATTCATGCTGCGCGATCAGGTGAAGTCGGCGAAGGCGATTCTGGAGTAG

Protein sequence :
MSTPQGHYSIGLDKTPANFVPLSPLSFLERTANVYPELTSVVYEGRHYTWKETRARCRRFASWLVRSGIGRGDTVAVMLP
NVPAMVEVHFAVPMAGAVLNALNIRLDSAAIAFQLDHGGAKIILVDPEFAGVVAEALTLMTKPKPLVIDVDDKMYPGSHR
IGELEYEYAVASGDPTFAGHRPEDEWDAISLGYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHCN
GWCFPWTLAAAAGINVCLRKVDPAKIFELIPKHGVTHMCGAPIVYNALINAPEALKGAAAKPVVGLIAGAAPPMAVLAGA
ETIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPVAERAKLKRRQGVPYPMQEAVTVLDPETMQEVPRDGETIGEVMFRGN
IVMKGYLKNEKATKEALAGGWFHTGDLGVLDADGYVIIKDRSKDIIISGGENVSSVEVEDVLYKHPAILFAAVVAKPDPK
WGEVPCAFVELKDGSSATEAEIIAYCREHLPGFKTPKSIVFSSIPKTSTGKIQKFMLRDQVKSAKAILE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01500.1 AMP-binding protein domain Not tested PAGI-1 Protein 4e-126 52