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Name : Rpdx1_2460 (Rpdx1_2460) Accession : YP_004108784.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : Integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2648835 - 2649764 bp Length : 930 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: oan:Oant_4683 integrase catalytic region DNA sequence : ATGGTAGCGCCCGCTGCCAAGCGGGATGCTGTCGCCCATCTCCAGACTGTCTATGGGATGAGCGAGCGGCGGGCGTGCCA GGTGCTGGGGTGCTGTCGGATGACAATGCGTTACCACGCCACCAGGATCGATGATGGTTTGCTGCGCGAGCGGATGAAGG CCATTGCCCATGAGCGGCGACGGTTCGGCTATCGACGGCTGCACGTTCTGCTCCGACGCGAGGGACATGTGGTCAATCAC AAGCGATTGTTCCGGATCTATCGCGAGGAGAAGCTGACTGTGCGTCGCCGAGGCGGCCGCAAGCGGGCCATGGGCACGCG GGCACCGATGCTGATCCCGATGGCGCCGAACCAGCGCTGGTCGCTTGACTTCGTCTCCGACCAGATGACCGACTGCCGGC GCTTCAGGGTGCTGACGGTGGTAGACGATTGCACGCGGGAATGCCTTGCCCTGGTTGCCGACACTTCGCTGTCTGGACTG CGGGTGGCGCGCGAACTCGAGGCGCTCATCGCCAGGCGCGGGAAGCCGGCAATGATCGTCAGCGACAACGGCACCGAGTT TACCTCGAACGCCATCCTGAGCTTCGCCGACCGCATGCGGATCGATTGGCATTACATCGCCCCGGGCAAGCCGATCCAGA ACGCCTTCATCGAAAGCTTCAACGGCCGGCTACGCGACGAACTGCTCAACGAAACGCTGTTCCCCTCGCTCTCGCACGTG CGGGCGACGGTGGCGTCGTGGCGAGCCGACTACAATCTCAACCGACCCCACTCGCGGCTCGGCTGGCTAACACCTGCCGA ATACGCCGACACCTTCAACCCGCGACGGGATCTGGCGCTGCGCTCAATGGCCAGCTCCACGCCAGCCCCCGTCGCTCACC CCGCCCAGATGGGTAAAACCAACCGTCAGAGTCTACGTCACCCTGGATAG Protein sequence : MVAPAAKRDAVAHLQTVYGMSERRACQVLGCCRMTMRYHATRIDDGLLRERMKAIAHERRRFGYRRLHVLLRREGHVVNH KRLFRIYREEKLTVRRRGGRKRAMGTRAPMLIPMAPNQRWSLDFVSDQMTDCRRFRVLTVVDDCTRECLALVADTSLSGL RVARELEALIARRGKPAMIVSDNGTEFTSNAILSFADRMRIDWHYIAPGKPIQNAFIESFNGRLRDELLNETLFPSLSHV RATVASWRADYNLNRPHSRLGWLTPAEYADTFNPRRDLALRSMASSTPAPVAHPAQMGKTNRQSLRHPG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 3e-54 | 47 |
| EXB25 | ABD94712.1 | hypothetical protein | Not tested | ExoU island B | Protein | 5e-24 | 44 |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 7e-37 | 44 |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 4e-43 | 42 |
