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Name : Rpdx1_2441 (Rpdx1_2441) Accession : YP_004108765.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2625937 - 2627388 bp Length : 1452 bp Strand : + Note : KEGG: bra:BRADO0028 succinate-semialdehyde dehydrogenase [NADP+] (SSDH); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase DNA sequence : ATGCTGATGCCGAGTGATCCGGGCCTGTTGGCCGAACGCTGCCTGATCGGCGACAAGTGGTGTGGCGAGCCCGTCGACGC GGTGTACAACCCCGCGACCGGCGAGCGTATCGGTGCGGTGCCGCGGTTCGGCACCGACGAGGCCGAGGAAGCGGTTCGCG CGGCCGGCCTCGCGTTCCGGCAATGGTCGAAACTGCTGGCGAAGGAGCGCGCAGCGATGCTGCGCGGCTGGTTCGATCAG ATCGTCGCCCACCGTGACGATCTGGCCCGGTTGCTGACTCAGGAACAGGGCAAGCCGCTGGCGGAAGCCCTCGGCGAGAT CGACTACGCGGCGTCGTTCGTGGAATTCTATGCCGAGGAGGCGCGCCGCATTTACGGCGAGACAATCCCGTCCCATCGCG CCGATTCCAGAACGATGGTGATCCGGCAGCCGGTCGGCGTCGTCGCGGCGATCACGCCGTGGAATTTTCCCGCCGCGATG ATCACCCGCAAGGTCGCACCGGCGCTGGCAGCCGGCTGCACCGTGGTGATCAAGCCGGCGCCGGAGACGCCGTTCACGGC GCTCGCGCTCGGCGTGCTGGCGCAGCGCGCCGGCTTTCCGGCCGGCGTCCTCAACATCGTCACCGGCGATGCGCCGGCGA TCGGCAAGGCGTGGACCGAACATCCGACGGTGCGGGCGATCAGCTTCACCGGCTCGACCGAGGTCGGCAAGATCCTGATG CGCCAGGCCGCCTCGACCGTGAAGAAGGTCGGTCTCGAACTCGGCGGCAATGCGCCGTTCATCGTGTTCGACGACGCCGA TCTCGATGCCGCGGTCGACGGCGTGATCGCCTCGAAGTTTCGCAACATGGGGCAGACCTGCGTCTGCGCCAACCGGATCT ACGCGCAGGACAAGATCTACGACGCCTTCGTCGAGAAGCTCGCCGCGAAGGTCGCCAAATTGCGGGTCGGCAACGGCCTG GACGACGGCGTCACCCAGGGGCCGCTGATCACCAAGGAGGCGGTGGCCAAGGTCGAGCATCATCTCGCGGATGCAGTCGC CAAGGGCGCCAACATCGTGCTCGGCGGCAAGCGCCACGCGCTCGGGCGCACGTTCTTCGAACCGACCGTGGTCACCGGCG TCACCGCCGACATGGTCGTCACGCGCGAGGAGACCTTCGGTCCGGTCGCGCCGGTGTATCGCTTCAGCGACGAAGCCGAC GTGATCGCGCAGGCTAACGACTCGCCGTTCGGGTTGGCAGCGTACTTCTACGCGCGCGACCTCGGACGCGTGTTCCGCGT CGCCGAGGCGCTCGAGTCCGGCATGGTCGGCGTCAACTCGGCGCTGCTCGGCGCCGACGTGGTGCCGTTCGGCGGCGTCA AGCAGTCCGGCCTCGGCCGCGAGGGCTCGCGCCACGGCATCGAGGAATACGTCGAGACCAAATACATCCTGCTCGGCGGT CTCGATCGCTGA Protein sequence : MLMPSDPGLLAERCLIGDKWCGEPVDAVYNPATGERIGAVPRFGTDEAEEAVRAAGLAFRQWSKLLAKERAAMLRGWFDQ IVAHRDDLARLLTQEQGKPLAEALGEIDYAASFVEFYAEEARRIYGETIPSHRADSRTMVIRQPVGVVAAITPWNFPAAM ITRKVAPALAAGCTVVIKPAPETPFTALALGVLAQRAGFPAGVLNIVTGDAPAIGKAWTEHPTVRAISFTGSTEVGKILM RQAASTVKKVGLELGGNAPFIVFDDADLDAAVDGVIASKFRNMGQTCVCANRIYAQDKIYDAFVEKLAAKVAKLRVGNGL DDGVTQGPLITKEAVAKVEHHLADAVAKGANIVLGGKRHALGRTFFEPTVVTGVTADMVVTREETFGPVAPVYRFSDEAD VIAQANDSPFGLAAYFYARDLGRVFRVAEALESGMVGVNSALLGADVVPFGGVKQSGLGREGSRHGIEEYVETKYILLGG LDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 9e-134 | 59 |
| unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 5e-64 | 41 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 3e-74 | 41 |
