Gene Information

Name : Rpdx1_2159 (Rpdx1_2159)
Accession : YP_004108488.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 2321976 - 2322506 bp
Length : 531 bp
Strand : +
Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: nha:Nham_1526 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein

DNA sequence :
ATGAGCATGCGCTGGTACATCGTCCACGCCTATTCGAACTTCGAGAAGAAGGTCGCGGAATCGATTCGCGAGCAGGCCAA
GCAGCGTGGCCTGGAAGATCTGTTCGAGCAGGTGCTGGTGCCGACCGAGAAGGTCACAGAGGTGCGCCGCGGCCGCAAGG
TCGACGCCGAGCGCAAGTTCTTCCCGGGCTACGTGCTGGTGAAGATGAATCTGACCGACGAAGCGTTCCACCTGATCAAG
AACACCCCGAAGGTCACCGGCTTCCTCGGCGCCGAGAACAAGCCGATGCCGATCTCGGAGTCCGAGGCGATGCGCATTCT
GCACCAGGTGCAGGAAGGCGTGGAGCGCCCGAAGGCGTCGGTGTCGTTCGAGATCGGCGAGAACGTCCGCGTCGCCGACG
GCCCGTTCGCGTCGTTCTCCGGCGTGGTCGAGGAAATCGACGAAGCGCGTTCGCGGGTGAAGGTCGCGGTGTCGATCTTC
GGCCGCGCGACGCCGGTCGAATTGGAATTCGGTCAGGTCGAGAAGGTTTGA

Protein sequence :
MSMRWYIVHAYSNFEKKVAESIREQAKQRGLEDLFEQVLVPTEKVTEVRRGRKVDAERKFFPGYVLVKMNLTDEAFHLIK
NTPKVTGFLGAENKPMPISESEAMRILHQVQEGVERPKASVSFEIGENVRVADGPFASFSGVVEEIDEARSRVKVAVSIF
GRATPVELEFGQVEKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 2e-42 50
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 2e-42 50