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Name : Rpdx1_1777 (Rpdx1_1777) Accession : YP_004108124.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1891635 - 1893635 bp Length : 2001 bp Strand : - Note : KEGG: bbt:BBta_6226 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC DNA sequence : ATGAATATCCGCTCCAATCCCGAGACCACCCGCGCGGCCGTCACCACCGGCGCCCTGCCCTCCTCGCGCAAGATCTACGC GAACCCGACCGCCGCGCCAGAACTGCGCGTGCCGCTGCGCGAGATCATCCTGAGCGAAGGCGCAGGCGAGCCGAACCTGC CGGTGTACGACACCTCCGGCCCCTATACCGATCCGAACGTGATCATCGACGTCAACAAGGGCCTGCCGCGCCCGCGCACA CAGTGGGTGATGGAGCGCGGCGGCGTCGAGCAATATCAGGGGCGCGACATCAAGCCGGAAGACAACGGCAATGTCGGCGC TGCGCACGCGGCGAAAGCCTTCACCGCGCACCACCAGCCGCTGCGCGGTCTCGACTCCCCTCCCCCTCGCGGGGAGGGGT CGGGGGTGGGGGGAGCCACACCGGCAGCGTTTGCGCGGGGTGCGGACCATCCACCAATGATCACCCAATACGAATTCGCC CGCGCCGGCATCATCACCAAGGAGATGATCTACGTCGCCGAGCGCGAGAATCTGGGGCGCAAGCAGCAGCTGGAGCGCGC CGAGGCGGCGCTGGCCGATGGCGAGTCGTTCGGCGCCGCGGTGCCGGCGTTCATCACCCCGGAATTCGTCCGCGACGAGA TCGCCCGCGGCCGCGCGATCATTCCGGCCAACATCAACCACGGCGAACTCGAGCCGATGATCATCGGCCGCAACTTCCTC ACCAAGATCAACGCCAATATCGGCAACTCGGCGGTGACCTCGTCGGTCGAGGAGGAAGTCGACAAGATGGTGTGGGCGAT CCGCTGGGGCGCCGACACCGTGATGGACCTCTCCACGGGCCGCAACATCCACACCACGCGCGAATGGATTTTGCGCAACT CGCCGGTGCCGATCGGCACCGTGCCGATCTATCAGGCGCTGGAGAAGTGCGAAGGCGATCCGGTCAAGCTGACCTGGGAG CTGTACAAGGACACGCTGATCGAGCAGGCCGAACAGGGCGTCGACTACTTCACCATCCACGCCGGCGTGCGGCTGCAATA CATCCACCTCACCGCCAGCCGCGTCACCGGCATCGTGTCGCGCGGCGGCTCGATCATGGCGAAGTGGTGCCTGGCGCATC ACAAGGAGAGCTTCCTCTACACGCATTTCGACGAGATCTGCGACCTGATGCGGAAGTACGACGTGTCGTTCTCACTCGGC GACGGCCTGCGGCCCGGCTCGATCGCCGATGCCAACGATCGCGCCCAGTTCGCCGAACTGGAGACGCTCGGCGAACTCAC CAAGATCGCCTGGGACAAGGGCTGCCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCACAAGATCAAGATCAACA TGGACAAGCAGCTGAAAGAGTGCGGCGAGGCGCCGTTCTACACCTTGGGCCCGCTGACCACCGATATCGCGCCGGGCTAT GATCACATCACCAGCGGCATCGGCGCCGCGATGATCGGCTGGTTCGGCTGCGCGATGCTGTGCTACGTCACGCCGAAGGA GCATCTCGGCCTGCCCGACCGCAACGACGTCAAGACCGGCGTGATCACCTACAAGATCGCCGCCCACGCAGCTGATCTGG CCAAGGGCCATCCCGCAGCGCAACTCCGCGACGACGCCCTGTCCCGCGCCCGCTTCGAATTCCGCTGGCAGGACCAGTTC AACCTCGGCCTCGATCCGGACACGGCGCAGGCCTTCCACGACGAGACCCTGCCGAAGGACGCCCACAAGGTCGCGCATTT CTGCTCGATGTGCGGCCCGAAATTCTGCTCGATGAAGATCACGCAGGACGTGCGCGACTACGCCGCCGGCCTCGGCGACA ACGAGAAAGCCGCCCTCTACCCGGTCGGCCACGCCGGCATGACCATCTCCGGCACCATCGAAGACGGCATGGCCCAGATG AGCGCCAAGTTCAAAGAGATGGGAAGCAGCGTGTATCTCGACGCCGACAAGGTGAAAGAGAGCAACAAGGCGCTGTCGTA A Protein sequence : MNIRSNPETTRAAVTTGALPSSRKIYANPTAAPELRVPLREIILSEGAGEPNLPVYDTSGPYTDPNVIIDVNKGLPRPRT QWVMERGGVEQYQGRDIKPEDNGNVGAAHAAKAFTAHHQPLRGLDSPPPRGEGSGVGGATPAAFARGADHPPMITQYEFA RAGIITKEMIYVAERENLGRKQQLERAEAALADGESFGAAVPAFITPEFVRDEIARGRAIIPANINHGELEPMIIGRNFL TKINANIGNSAVTSSVEEEVDKMVWAIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCEGDPVKLTWE LYKDTLIEQAEQGVDYFTIHAGVRLQYIHLTASRVTGIVSRGGSIMAKWCLAHHKESFLYTHFDEICDLMRKYDVSFSLG DGLRPGSIADANDRAQFAELETLGELTKIAWDKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGY DHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRNDVKTGVITYKIAAHAADLAKGHPAAQLRDDALSRARFEFRWQDQF NLGLDPDTAQAFHDETLPKDAHKVAHFCSMCGPKFCSMKITQDVRDYAAGLGDNEKAALYPVGHAGMTISGTIEDGMAQM SAKFKEMGSSVYLDADKVKESNKALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 63 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 61 |
