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Name : Rpdx1_1689 (Rpdx1_1689) Accession : YP_004108039.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : 3.5.1.5 Position : 1797248 - 1798960 bp Length : 1713 bp Strand : + Note : TIGRFAM: urease, alpha subunit; KEGG: bja:blr1457 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein DNA sequence : ATGTCGGTCAAGATCTCACGTTCCGTCTATGCTGACATGTTCGGTCCCACTACTGGCGACCGCGTTCGGCTCGCCGACAC CGATCTGATCATCGAGGTTGAGAGGGATCTCACCACCTACGGCGAGGAGGTGAAGTTCGGCGGCGGCAAGGTGATCCGCG ACGGCATGGGGCAGTCGCAGGTGACCAACGCCGACGGCGCCGCCGATACGGTGATCACCAACGCGCTGATCGTCGACCAT TGGGGTATCGTCAAGGCCGACATCGCGCTCAAGGCCGGGATGATCGCGGCGATCGGTAAGGCCGGCAATCCGGACATCCA GCCCAATGTCGATATCGTCATCGGCCCGGGCACCGACGTGATCGCCGGCGAGGGCAAGATCCTCACCGCCGGCGGCTTCG ACAGCCACATCCATTTCATCTGCCCGCAGCAGATCGAACATGCGCTGATGAGCGGCGTCACCACGATGCTCGGCGGCGGC ACTGGCCCGTCGCATGGCACCTTCGCGACGACGTGTACGCCGGGGCCGTGGCATATCGGCCGGATGATTCAGTCGTTCGA TGCCTTCCCGGTCAATCTCGGCATCTCCGGCAAGGGCAATGCCGCGCTGCCCGGTCCGCTGAAGGAGATGATCGAAGGCG GGGCCTGTGCGCTCAAGCTGCACGAGGACTGGGGTACGACGCCGGCGGCGATCGACAACTGCCTCACCGTCGCGGATGAA TACGACATCCAGGTGATGATCCACACCGACACGCTCAATGAGTCGGGGTTCGTCGAAGACACCGTGAAGGCGTTCAAGGG CCGCACCATTCACGCCTTCCACACTGAAGGCGCCGGCGGCGGCCATGCGCCGGACATCATCAAGGTGGCTAGCCTGGAGA ACGTGCTGCCGTCGTCGACCAATCCGACCCGGCCGTTCACGCGGAACACCATCGACGAGCATCTCGACATGCTGATGGTG TGCCACCATCTCGATCCGTCGATCGCGGAAGATCTGGCGTTTGCCGAGAGTCGCATCCGCAAGGAGACGATCGCGGCCGA AGACATTCTGCACGACCTCGGCGCGCTGTCGATGATGTCGTCGGACAGTCAGGCGATGGGCCGGCTCGGCGAAGTGATCA TCCGCACCTGGCAGACCGCCGACAAAATGAAGAAGCAGCGCGGCGCGCTGCCGCAGGACTCGGCGCGGAATGATAACTTC CGGGTCAAACGCTACATCGCCAAGTACACGATCAACCCGGCGATCGCGCATGGCGTGTCGAAGCTGATCGGTTCGGTCGA AAAGGGCAAGATGGCAGACCTCGTGCTGTGGTCGCCGGCCTTCTTCGGCGTCAAGCCGGACTGCATCATCAAGGGCGGCA GCATCGTCGCCGCGCCGATGGGCGATCCCAACGCCTCGATCCCGACGCCGCAGCCGGTGCACTACCAACCGATGTTCGGC GCCTTCGGCAAGGCGCTGACCGCGTCGTCGGTGGTGTTCACCTCGCAGGCCGCCGCCGCCGGCAATCTCGCCCGTGATCT CGGCATCGCCAAGACGCTTTATCCGATCAGCAACGTCCGCGGCGGCATCTCCAAGAAGAGCATGATCCATAACGACGCGA CGCCGAAGCTCGAAGTCGATCCCGAGACCTACGAAGTCCGAGCCGACGGCGAACTCCTGACCTGCGCGCCGGCCGAAGTG CTGCCGTTGGCGCAGCGCTACTTCATGTTCTGA Protein sequence : MSVKISRSVYADMFGPTTGDRVRLADTDLIIEVERDLTTYGEEVKFGGGKVIRDGMGQSQVTNADGAADTVITNALIVDH WGIVKADIALKAGMIAAIGKAGNPDIQPNVDIVIGPGTDVIAGEGKILTAGGFDSHIHFICPQQIEHALMSGVTTMLGGG TGPSHGTFATTCTPGPWHIGRMIQSFDAFPVNLGISGKGNAALPGPLKEMIEGGACALKLHEDWGTTPAAIDNCLTVADE YDIQVMIHTDTLNESGFVEDTVKAFKGRTIHAFHTEGAGGGHAPDIIKVASLENVLPSSTNPTRPFTRNTIDEHLDMLMV CHHLDPSIAEDLAFAESRIRKETIAAEDILHDLGALSMMSSDSQAMGRLGEVIIRTWQTADKMKKQRGALPQDSARNDNF RVKRYIAKYTINPAIAHGVSKLIGSVEKGKMADLVLWSPAFFGVKPDCIIKGGSIVAAPMGDPNASIPTPQPVHYQPMFG AFGKALTASSVVFTSQAAAAGNLARDLGIAKTLYPISNVRGGISKKSMIHNDATPKLEVDPETYEVRADGELLTCAPAEV LPLAQRYFMF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 4e-177 | 68 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 4e-177 | 68 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 1e-155 | 62 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-155 | 62 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-155 | 62 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-155 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpdx1_1689 | YP_004108039.1 | urease subunit alpha | VFG0270 | Protein | 6e-154 | 62 |
