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Name : Rpdx1_1688 (Rpdx1_1688) Accession : YP_004108038.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Virulence Product : urease subunit beta Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0832 EC number : 3.5.1.5 Position : 1796941 - 1797246 bp Length : 306 bp Strand : + Note : TIGRFAM: urease, beta subunit; KEGG: bbt:BBta_7011 urease subunit beta; PFAM: Urease beta subunit DNA sequence : ATGATCCCCGGTGAACTGTTCATCGAAGACGGCGAGATCGAGCTCAACGCCGGGCGTGCCACGGTGACGCTGATGGTGGC CAACGCCGGCGACCGGCCGATCCAGGTCGGGTCTCACTATCATTTCTTCGAAACGAACCCGGCGCTGCAATTCGACCGCG ACAAAGCGCGCGGCATGCGGCTCGACATCGCGGCCGGCACTGCCGTCCGCTTCGAGCCCGGCCAGAGCCGAGACGTGCAG CTCGTCGCGCTCGCCGGCCGGCGCACGATCTACGGCTTCCGCGGCGACGTGATGGGGAAACTCTGA Protein sequence : MIPGELFIEDGEIELNAGRATVTLMVANAGDRPIQVGSHYHFFETNPALQFDRDKARGMRLDIAAGTAVRFEPGQSRDVQ LVALAGRRTIYGFRGDVMGKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureB | NP_286679.1 | urease subunit beta | Virulence | TAI | Protein | 1e-29 | 72 |
| ureB | NP_287087.1 | urease subunit beta | Not tested | TAI | Protein | 1e-29 | 72 |
| ureB | YP_005684267.1 | Urease beta subunit | Not tested | PiCp 7 | Protein | 2e-26 | 60 |
| ureB | YP_005686359.1 | Urease beta subunit | Not tested | PiCp 7 | Protein | 2e-26 | 60 |
| ureB | YP_003784326.1 | urease subunit beta | Not tested | PiCp 7 | Protein | 3e-26 | 60 |
| ureB | YP_005682175.1 | Urease beta subunit | Not tested | PiCp 7 | Protein | 2e-26 | 60 |
