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Name : Rpdx1_1458 (Rpdx1_1458) Accession : YP_004107813.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 1558162 - 1558929 bp Length : 768 bp Strand : - Note : manually curated; TIGRFAM: flagellar biosynthetic protein FliP; KEGG: nha:Nham_1390 flagellar biosynthesis protein FliP; PFAM: type III secretion system inner membrane P protein DNA sequence : GTGAGCGCCTCGACCACCCCGCGTAGAGTTTTCATCATCCTATCGGTCTGGATCGTCGCGGCTCTCGCGATGATTGCGCC TGCGCAGGCGCAGGACATCAGCATCAATCTCGGCGGCCAGGGCGGCCCCGGCGTCACCGAGCGCGCGATCCAGTTGATCG CGCTGCTCACCGTGCTGTCGATCGCACCGTCGATCCTGATCATGATGACGTCGTTCACCCGGATCGTGGTGGTGCTGTCG TTGCTGCGCACCGCGCTCGGTACCGCGACCGCACCGCCGAACGCGGTGATCATCGCGCTGGCGCTGTTCCTGACCGCTTT CGTGATGGGACCGACGCTGCAGAAAGCCTATGACGACGGCATCAAGCCGCTGATCGCCAACGAGATCGGAGTCGACGACG CGCTGGTGCGGGCATCCGGACCGATGCGGGTGTTCATGCAGAAGAACGTCCGCGAGAAGGATCTGAAGCTGTTTCTCGAC CTGTCCGGCGAACCGCCGCCGGCGACGCCGGAGGATCTGTCGCTGCGCATCCTGATGCCGGCGTTCCTGATCTCGGAGCT GAAGCGCGCGTTCGAGATCGGCTTCCTGCTGTTCCTGCCCTTCCTGATCATCGACCTGGTGGTCGCCTCGATCCTGATGT CGATGGGCATGATGATGCTGCCGCCGGTGGTGGTGTCGCTGCCGTTCAAGCTGATCTTCTTCGTCCTGGTCGACGGCTGG TCGCTGGTCGCAGGCTCGCTGGTGCAGAGCTATTCGGGCGGCGGGTAG Protein sequence : MSASTTPRRVFIILSVWIVAALAMIAPAQAQDISINLGGQGGPGVTERAIQLIALLTVLSIAPSILIMMTSFTRIVVVLS LLRTALGTATAPPNAVIIALALFLTAFVMGPTLQKAYDDGIKPLIANEIGVDDALVRASGPMRVFMQKNVREKDLKLFLD LSGEPPPATPEDLSLRILMPAFLISELKRAFEIGFLLFLPFLIIDLVVASILMSMGMMMLPPVVVSLPFKLIFFVLVDGW SLVAGSLVQSYSGGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 1e-26 | 48 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 5e-26 | 43 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 1e-25 | 43 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-25 | 43 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 6e-26 | 43 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 6e-26 | 43 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 9e-25 | 42 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-20 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpdx1_1458 | YP_004107813.1 | flagellar biosynthetic protein FliP | VFG2494 | Protein | 8e-50 | 56 |
| Rpdx1_1458 | YP_004107813.1 | flagellar biosynthetic protein FliP | VFG2338 | Protein | 8e-47 | 55 |
| Rpdx1_1458 | YP_004107813.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 4e-44 | 48 |
| Rpdx1_1458 | YP_004107813.1 | flagellar biosynthetic protein FliP | VFG2016 | Protein | 2e-40 | 48 |
| Rpdx1_1458 | YP_004107813.1 | flagellar biosynthetic protein FliP | VFG0044 | Protein | 1e-26 | 44 |
| Rpdx1_1458 | YP_004107813.1 | flagellar biosynthetic protein FliP | VFG0519 | Protein | 3e-26 | 43 |
| Rpdx1_1458 | YP_004107813.1 | flagellar biosynthetic protein FliP | VFG0394 | Protein | 6e-27 | 43 |
| Rpdx1_1458 | YP_004107813.1 | flagellar biosynthetic protein FliP | VFG0188 | Protein | 2e-28 | 43 |
