|
Name : Rpdx1_1121 (Rpdx1_1121) Accession : YP_004107480.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 1193530 - 1195602 bp Length : 2073 bp Strand : + Note : KEGG: nha:Nham_2993 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydro DNA sequence : ATGCAAGCTTCCAAACTCCGCAAGCGGGCGAGAAAGACCACACTGCTCGATCCCGCGATCATGTTGCCGGCGATCGGTCA GGCGTTCGTCAAGCTCGATCCGCGCACGCTGGTGAAGAACCCGGTGATGTTCGTACTCGAAGTCGTGACGGTGCTGGCCA CGGTCTTGTTGATCCGGGACATGGCGACGGGCAGCGGCGAGCTCGCCTTCGAACTCCAGATCGCGATCTGGCTGTGGTTC ACCGTGCTGTTCGCGAATTTCGCCGAAGCGATCGCCGAGGGGCGTGGCAAGGCGCAGGCCGATACGCTGCGGCAGACGCG CGCCAGCACGGTCGCGAAGCGGTTGCTGATGTCCGACAACAATGAACTCTTCGAAAGGGTCGCGGCCGAGCGTCTCATGG TCGATGATCTGGTGGTGTGCGAGGCCGGCGACGTGATCCCTGGCGACGGCGAGGTCATCGAGGGCATCGCTTCGGTCAAC GAAGCCGCGGTGACCGGTGAGTCCGCGCCGGTGATCAGGGAGTCGGGCGGCGACCGCTCGGCGGTGACCGGCGGCACGAC GGTTCTGTCCGACCGCATCGTGGTCCGCATCACCTCGCAGCCCGGTTCCTCGTTTCTCGATCGCATGATCAAGCTGGTCG AGGGAGCCGAGCGGCAAAAGACGCCGAACGAGATAGCGCTCAATATCCTGCTGGTCGGGCTCACCATCATCTTCGTGTTC GCCACCGCTTCGATCCCGAGCTTCGCCTCCTATGCGGGCGGATCGATCTCGGTGATCGTGCTGGTGGCGCTGTTCGTCAC GCTGATTCCGACGACCATTGGCGCATTGCTGTCGGCGATCGGAATCGCCGGCATGGATCGGCTGGTGCGCTTCAACGTGC TGTCGATGTCGGGACGCGCCGTCGAGGCGGCAGGCGATATCGACACGCTGTTGCTGGACAAGACCGGCACGATCACCTTC GGCAACAGACTCGCCACCGAGATCATCCCGGTGCCGGGCGTCACCGAACAAGAAGCGGCCACTGCGGCGCTGCTCGCCAG CGAAGCCGACGAGACCGCCGAAGGGCGCTCCATCGTGGCGCTGGCGCAGGAGAAATATGCTGTAGCGCCGCAACCGGCGG ACCAGCGAGCGAAGTTCGTTCCGTTCAGCGCCAATACGCGGTTGTCCGGCGTCGACAGTAACGGCCGCCGCTTGCGCAAG GGGGCGATCGACTCGGTCTTCGGCTTCGTGCGGGAGCAATCCGGCAGTGAGGTAAGCGAGCCGCCGGCGTTCCGCGCCGC GGTCGACCGCATCGCCCGCTCCGGTGGCACGCCGCTCGGACTGGCGGAGGGAGGGAGACTGCTCGGCGTCATCCATCTCA AGGACGTGGTCAAGCCGGACGTCCGGGACCGTTTCGCCGCGCTCCGGCGGATGGGAATCAAGACGGTGATGATCACCGGC GACAATCCGGTGACCGCGGCCTCGATCGCATCCGAAGCCGGCGTCGACGATTTCATTGCCCAGGCCACCCCCGAGGACAA GCTGCGCTATATCCGTGGCGAGCAGGCGCAGGGGCGCCTGATCGCGATGTGCGGCGATGGAACCAACGATGCCCCGGCGC TGGCGCAGGCCGATGTCGGGGTGGCGATGCAGAGCGGCACGCAGGCCGCGCGCGAGGCCGGCAACATGGTCGACCTCGAT TCCGATCCGACCAAGCTGATCGAGGTGGTCGAAATCGGCAAGCAACTACTGATGACGCGCGGCGCGCTCACGACGTTTTC GATCGCCAACGACGTCGCGAAGTATTTCGCGATCATTCCGGCGATGTTCGTGGCGTTCTATCCGCAGCTCGGCGCGCTCA ATGTCATGGGTCTGTCGACGCCGCAGAGCGCCATTCTGTCGGCAATCATCTTCAACGCGCTGATCATCATCGCGCTGATT CCGCTGGCGTTGAAGGGCGTCACCTACCGGCCGATCGGCGCCGCGGCGCTGCTGCGGCGGAATCTCCTGATCTACGGACT TGGCGGCATCGTGCTGCCGTTTGTCGGCATCAAGGCGATCGACCTCGCCGTCACCGCGCTGCATCTCGTGTAA Protein sequence : MQASKLRKRARKTTLLDPAIMLPAIGQAFVKLDPRTLVKNPVMFVLEVVTVLATVLLIRDMATGSGELAFELQIAIWLWF TVLFANFAEAIAEGRGKAQADTLRQTRASTVAKRLLMSDNNELFERVAAERLMVDDLVVCEAGDVIPGDGEVIEGIASVN EAAVTGESAPVIRESGGDRSAVTGGTTVLSDRIVVRITSQPGSSFLDRMIKLVEGAERQKTPNEIALNILLVGLTIIFVF ATASIPSFASYAGGSISVIVLVALFVTLIPTTIGALLSAIGIAGMDRLVRFNVLSMSGRAVEAAGDIDTLLLDKTGTITF GNRLATEIIPVPGVTEQEAATAALLASEADETAEGRSIVALAQEKYAVAPQPADQRAKFVPFSANTRLSGVDSNGRRLRK GAIDSVFGFVREQSGSEVSEPPAFRAAVDRIARSGGTPLGLAEGGRLLGVIHLKDVVKPDVRDRFAALRRMGIKTVMITG DNPVTAASIASEAGVDDFIAQATPEDKLRYIRGEQAQGRLIAMCGDGTNDAPALAQADVGVAMQSGTQAAREAGNMVDLD SDPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFVAFYPQLGALNVMGLSTPQSAILSAIIFNALIIIALI PLALKGVTYRPIGAAALLRRNLLIYGLGGIVLPFVGIKAIDLAVTALHLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 2e-156 | 59 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-156 | 59 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-131 | 53 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-131 | 53 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-131 | 53 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-131 | 53 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-131 | 53 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 1e-132 | 53 |
