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Name : Rpdx1_1108 (Rpdx1_1108) Accession : YP_004107467.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 1177533 - 1179518 bp Length : 1986 bp Strand : - Note : KEGG: nwi:Nwi_2734 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region DNA sequence : ATGGCGCAGCTCGATCATTCCCGTATGGCAAACGCAATCCGGGCGCTGGCGATGGATGCGGTGGAGAAGGCCAAATCCGG CCATCCCGGGCTGCCGATGGGCGCCGCCGACGTCGCGACCGTGCTGTGGGCGCAGTTCTTGAAGTTCGATGCGGCCGACC CGCACTGGCCGGACCGCGACCGTTTCATCCTCTCCGCCGGCCACGGCTCGATGCTGCTCTATGCGCTGCTGTACCTGACC GGCAACGAGGAGATGACGCTGGATCAGATCAAGAATTTCCGCCAACTCGACTCCAGGACCCCGGGCCACCCTGAGAACTG CATCACCTCCTCGGTCGAGACCACGACCGGTCCGCTGGGCCAGGGTGTGGCCTCCTCGGTCGGCACAGCGCTGGCGGAGC GGCTATTGCAGGCGGAGTTCGGCGACATCGTCGATCACTACACCTATGTGCTGTGCTCGGACGGCGACCTGATGGAAGGC GTCAGCCACGAGGCGATCGCGCTGGCCGGGCATCTCAGGCTGAGCAAGCTGATCTTCCTGTACGACGACAACGGCATCTC GATCGACGGTCCGCTGTCGCTGACCGATAATGTCGATCAGGTTGCGCGCTTCCAGGCACATGGCTGGAATTCGTTCCGGA TCGACGGCCACGACCACAAGGCGATCGCCGATGCGATCCGCAAGGCGCAGACCTCCGACCGGCCGACCATGATCGCCTGC AAGACTACGATCGGCTTCGGCGCGCCGCACAAGGCCGGCACTTCGAAGGCCCATGGCGAGCCGCTCGGCGCCGAGGAACT GGCCGGCGCCAAGAAGGCGCTCGGTTGGGAGTACGGCCCGTTCGAGATCCCCGACGACGTGCTCGGTGCCTGGCGCAATG TCGGCAAGCAGGGCGCCACGGCCCGCGCCGACTGGCTGGCCCGGCTCGAGGCGCTGCCGGCGGACAAGCGCGACGATTTC AGGCGCCGGGTGATTGATCGCAAGCGGCCGGCGGCGATTGCGGATGCGATCCGCGCCCTGAAAGACAGATTGGTCACCGA GCCGCAGACCATCGCGACCCGCAAGGCCAGCGAACTGGCGCTGGAAGCGCTGACCCCGGTGGTACCGGAACTGCTGCTCG GCTCCGCCGACCTGACGCCTTCCAACAACACCCGCGTCAAACAGGCCAAGGACGTCACGCCGGACGATTTCTCGGGCCGC TACATCCACTACGGCATCCGCGAGATGGGCATGGCGGCGGCGATGAACGGCCTGGCGATGCACGGCGGCTTTGCGCCGGC GGGCGGCACCTTCATGTGCTTTGCCGACTACGCACGGCCGTCGATGCGGATCTCGGCGCTGTCGCATGTGCCCGTGGTTT ACATCATGACCCACGACTCGATCGGGCTCGGCGAGGACGGCCCGACCCATCAGCCGGTCGAACACCTCGCGTCGTTGCGG GCGATGCCGAACATGCGGGTATTCCGCCCGGCCGATGCGGTGGAGACCGCCGAGTGCTGGCAGCTCGCACTCGAGAACAC CTCCGGCCCGACGGTGCTGGCGCTGTCGCGGCAGAACCTCGCCCAGGTCCGCACCGCGACCTCCGAGGCCAACCTCTGCG CCACCGGCGGCTATGAGCTGATCCGGGCGCCCGGCAAGCCGCAGGTGTCGATCTTCGCCACCGGCTCCGAGGTCGAAATC GCCGTTGCGGCGCAGAAACTTCTGGAGGTGCAGGGCATCGCGGCCCGGGTTGTCTCGGTGCCGTCACTCGACCTACTGCT GGCCCAGGACGAAGCCACCCGGGCCGGAATCATCGGCGATGCGCCGGTCAAGGTTGCGGTCGAAGCGGCGGTGCGGTTCG GCTGGGACGCGGTCATCGGCCCGGACGGCGGCTTTGTCGGGATGTCGAGTTTCGGCGCCAGTGCCCCGGCGAAAGAACTC TACAAACATTTCGGCATCACCGCGGAAGCGGTGGCCGACGCCGCCAGGCAGCGGATCAGCGCCTAA Protein sequence : MAQLDHSRMANAIRALAMDAVEKAKSGHPGLPMGAADVATVLWAQFLKFDAADPHWPDRDRFILSAGHGSMLLYALLYLT GNEEMTLDQIKNFRQLDSRTPGHPENCITSSVETTTGPLGQGVASSVGTALAERLLQAEFGDIVDHYTYVLCSDGDLMEG VSHEAIALAGHLRLSKLIFLYDDNGISIDGPLSLTDNVDQVARFQAHGWNSFRIDGHDHKAIADAIRKAQTSDRPTMIAC KTTIGFGAPHKAGTSKAHGEPLGAEELAGAKKALGWEYGPFEIPDDVLGAWRNVGKQGATARADWLARLEALPADKRDDF RRRVIDRKRPAAIADAIRALKDRLVTEPQTIATRKASELALEALTPVVPELLLGSADLTPSNNTRVKQAKDVTPDDFSGR YIHYGIREMGMAAAMNGLAMHGGFAPAGGTFMCFADYARPSMRISALSHVPVVYIMTHDSIGLGEDGPTHQPVEHLASLR AMPNMRVFRPADAVETAECWQLALENTSGPTVLALSRQNLAQVRTATSEANLCATGGYELIRAPGKPQVSIFATGSEVEI AVAAQKLLEVQGIAARVVSVPSLDLLLAQDEATRAGIIGDAPVKVAVEAAVRFGWDAVIGPDGGFVGMSSFGASAPAKEL YKHFGITAEAVADAARQRISA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-140 | 50 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 7e-132 | 49 |
