Gene Information

Name : Rpdx1_1050 (Rpdx1_1050)
Accession : YP_004107409.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Virulence
Product : UTP-glucose-1-phosphate uridylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : 2.7.7.9
Position : 1116754 - 1117629 bp
Length : 876 bp
Strand : -
Note : TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; KEGG: bbt:BBta_6959 UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase

DNA sequence : 
ATGAAAATCCGCAAAGCCGTCTTCCCGGTCGCCGGCCTCGGCACCCGCGTTCTCCCCGCCACCAAGGCGATGCCGAAGGA
GATGCTGACGATCGTCGACAAGCCGTTGATCCAGTACGTCGTCGACGAAGCGCGGGAAGCGGGCATCGAACACTTCGTGT
TCGTCACCGGGCGCAACAAGGGCATGATCGAGGACCACTTCGACCGTCAGTTCGAACTCGATGTCACGCTGGAGAAGCGC
AACAAGAAGAACGAGATGGAGATCCTGGCCCGGGACCAGCCGGAGGCCGGCGCGATGAGCTTCACCCGCCAGCAGGCGCC
GCACGGACTCGGCCACGCGGTGTGGTGCGCCCGCGACATCGTCGGCAACGAGCCGTTCGCGGTGGTGCTGCCCGACGAAT
TGGTGCTCAATACTCCGGGCTGCCTGAAGCAGATGATCCAGGCCGCCGAAAAGCTCGGCGACAAGGCCAACGTCATCGCC
GTGGAAGAAGTGCCGGCCGACCGCACCCACCAGTACGGCATCTGCGGCGTCGGCAAGCGGACCGGCAAGGTGTTCGAGGT
CGACGGCATGGTCGAGAAACCGGCTCCCGGCACGGCGCCGTCGAACCTGTCGATCACCGGGCGCTACATCCTGCAGCCGG
AGATCTTCAAGATCCTGGCGACGCAGGAGCGCGGCGCCGGCGGTGAGATCCAACTCACCGACGCGATGATCGGGCTGTCG
AAGACCCAGAAATTCTATGGCGTGGAGTTCGAAGGCGAGCGACACGACTGCGGATCGAAGGCCGGCTTCCTGCGCGCCAA
CATCGCGTTTGCAATGCAGCGCGACGACCTGCGCGACGCCCTGATCGACGACATGAAGCGTTATCTGGACAAATAG

Protein sequence : 
MKIRKAVFPVAGLGTRVLPATKAMPKEMLTIVDKPLIQYVVDEAREAGIEHFVFVTGRNKGMIEDHFDRQFELDVTLEKR
NKKNEMEILARDQPEAGAMSFTRQQAPHGLGHAVWCARDIVGNEPFAVVLPDELVLNTPGCLKQMIQAAEKLGDKANVIA
VEEVPADRTHQYGICGVGKRTGKVFEVDGMVEKPAPGTAPSNLSITGRYILQPEIFKILATQERGAGGEIQLTDAMIGLS
KTQKFYGVEFEGERHDCGSKAGFLRANIAFAMQRDDLRDALIDDMKRYLDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 3e-63 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpdx1_1050 YP_004107409.1 UTP-glucose-1-phosphate uridylyltransferase VFG0964 Protein 2e-60 46